mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-u7f2bmdf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:33,929 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:34,829 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:34,999 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:35,974 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:36,212 - cnv_pipe.batch.run_model - INFO - Processing cluster 1088 with 191 probes
2026-06-05 03:33:36,596 - cnv_pipe.batch.run_model.cluster1088 - INFO - Child process started for cluster 1088 with 191 probes
2026-06-05 03:34:33,595 - cnv_pipe.batch.run_model.cluster1088 - INFO - Child process finished cluster 1088. Wrote cluster_1088_samples.csv and cluster_1088_params.csv
2026-06-05 03:34:33,596 - cnv_pipe.batch.run_model - INFO - Cluster 1088 finished in 57.38 seconds. Status: SUCCESS