cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_Blood.md.bam --algo AlignmentStat Sig_18_Blood.sentieon.alignment_summary_metrics --algo InsertSizeMetricAlgo Sig_18_Blood.sentieon.insert_size_metrics --algo QualDistribution Sig_18_Blood.sentieon.quality_distribution_metrics --algo BaseDistributionByCycle Sig_18_Blood.sentieon.base_distribution_by_cycle_metrics --algo MeanQualityByCycle Sig_18_Blood.sentieon.quality_by_cycle_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:163000001, elapsed 0.0s, est remaining 0.8s, peak mem 75MB, user 0.1s, sys 0.8s, output queue size 4
progress 10% @chr2:74000001, elapsed 0.1s, est remaining 0.7s, peak mem 75MB, user 0.3s, sys 1.7s, output queue size 14
progress 15% @chr2:237000001, elapsed 0.1s, est remaining 0.6s, peak mem 78MB, user 0.3s, sys 2.7s, output queue size 25
progress 20% @chr3:155000001, elapsed 0.1s, est remaining 0.6s, peak mem 78MB, user 0.4s, sys 3.8s, output queue size 12
progress 25% @chr4:116000001, elapsed 0.2s, est remaining 0.6s, peak mem 78MB, user 0.5s, sys 4.8s, output queue size 9
progress 30% @chr5:86000001, elapsed 0.2s, est remaining 0.5s, peak mem 78MB, user 0.6s, sys 5.8s, output queue size 11
progress 35% @chr6:67000001, elapsed 0.3s, est remaining 0.5s, peak mem 78MB, user 0.6s, sys 6.9s, output queue size 23
progress 40% @chr7:56000001, elapsed 0.3s, est remaining 0.4s, peak mem 78MB, user 0.7s, sys 8.0s, output queue size 6
progress 45% @chr8:59000001, elapsed 0.3s, est remaining 0.4s, peak mem 78MB, user 0.7s, sys 9.1s, output queue size 3
progress 50% @chr9:75000001, elapsed 0.4s, est remaining 0.4s, peak mem 78MB, user 0.8s, sys 10.1s, output queue size 15
progress 55% @chr10:98000001, elapsed 0.4s, est remaining 0.3s, peak mem 78MB, user 1.0s, sys 11.1s, output queue size 10
progress 60% @chr11:123000001, elapsed 0.4s, est remaining 0.3s, peak mem 78MB, user 1.2s, sys 12.1s, output queue size 11
progress 65% @chr13:15000001, elapsed 0.5s, est remaining 0.3s, peak mem 78MB, user 1.3s, sys 13.3s, output queue size 13
progress 70% @chr14:59000001, elapsed 0.5s, est remaining 0.2s, peak mem 78MB, user 1.3s, sys 14.3s, output queue size 2
progress 75% @chr16:14000001, elapsed 0.6s, est remaining 0.2s, peak mem 78MB, user 1.5s, sys 15.3s, output queue size 11
progress 80% @chr18:2000001, elapsed 0.6s, est remaining 0.1s, peak mem 78MB, user 1.5s, sys 16.4s, output queue size 8
progress 85% @chr20:23000001, elapsed 0.6s, est remaining 0.1s, peak mem 78MB, user 1.6s, sys 17.4s, output queue size 2
progress 90% @chrX:39000001, elapsed 0.7s, est remaining 0.1s, peak mem 99MB, user 2.3s, sys 17.9s, output queue size 114
progress 95% @chrY:34000001, elapsed 0.8s, est remaining 0.0s, peak mem 114MB, user 2.9s, sys 18.7s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.5s, est remaining 0.0s, peak mem 126MB, user 5.7s, sys 19.6s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: AlignmentStat InsertSizeMetricAlgo QualDistribution BaseDistributionByCycle MeanQualityByCycle
license: sentieon:Metrics=31
input file size: 52290594
reads: 1001133
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.026 user 9.922 sys 11.208 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.003 user 0.004 sys 1.475 real
idle: 71 calls 0.017 user 0.034 sys 49.994 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 132194304 mem 5.917 user 20.218 sys 2.522 real