[2026-06-05T03:28:54.405729Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T03:28:54.427302Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T03:28:54.427337Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T03:28:54.427345Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T03:28:54.427350Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX5X8m8G'
[2026-06-05T03:28:54.427354Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T03:28:54.427359Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T03:28:54.427363Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T03:28:54.427367Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-05T03:28:54.427371Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T03:28:54.427374Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T03:28:54.427378Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T03:28:54.427381Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T03:28:54.427385Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T03:28:54.428358Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T03:28:54.428482Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T03:28:54.434572Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T03:28:54.435407Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T03:28:54.435505Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T03:28:54.435802Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T03:28:54.436063Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.436909Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.437004Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.437076Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.437288Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.437500Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.437902Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.438084Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.438208Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.438692Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.439123Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.440443Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.441126Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.441573Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T03:28:54.441862Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.441950Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.442073Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.442139Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.442254Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.442319Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.442494Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.442807Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.443119Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.443193Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.443305Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.443371Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.443486Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.443551Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.443660Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.443725Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.443887Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.444005Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.444134Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.444231Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.444868Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.444943Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.445058Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.445126Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.445243Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.445305Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.445413Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.445476Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.445585Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.445651Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.445757Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.445819Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.446264Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.446696Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.446820Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.446915Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.447023Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.447096Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.447203Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.447266Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.447374Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.447437Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.462889Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.463245Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.463321Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.463464Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.463538Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.463620Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.463688Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.463791Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.463890Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.463946Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T03:28:54.472323Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.472877Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.473224Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.473871Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.474591Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.475134Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.476094Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.477865Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.479193Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.484012Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0003] Task initiated on local node
[2026-06-05T03:28:54.486641Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0000] Task initiated on local node
[2026-06-05T03:28:54.490521Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0006] Task initiated on local node
[2026-06-05T03:28:54.492988Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0001] Task initiated on local node
[2026-06-05T03:28:54.493383Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0003] Task initiated on local node
[2026-06-05T03:28:54.497052Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-05T03:28:54.497275Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0004] Task initiated on local node
[2026-06-05T03:28:54.499334Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0000] Task initiated on local node
[2026-06-05T03:28:54.597157Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.597721Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.601921Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0000] Task initiated on local node
[2026-06-05T03:28:55.264696Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.265432Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.268641Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-05T03:28:55.330191Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.330933Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.334373Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-05T03:28:55.395781Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.396486Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.399698Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0006] Task initiated on local node
[2026-06-05T03:28:55.511565Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.511674Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.512347Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.512661Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.517032Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0003] Task initiated on local node
[2026-06-05T03:28:55.517865Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-05T03:28:55.578184Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.578889Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.582150Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0002] Task initiated on local node
[2026-06-05T03:28:55.894399Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.895144Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.898091Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0000] Task initiated on local node
[2026-06-05T03:28:55.959352Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.960095Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.963704Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-05T03:28:56.928339Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.929077Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.932065Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-05T03:28:56.993464Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.994244Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.997615Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0004] Task initiated on local node
[2026-06-05T03:28:57.026927Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.027553Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.031101Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0004] Task initiated on local node
[2026-06-05T03:28:57.092147Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.092875Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.096351Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0001] Task initiated on local node
[2026-06-05T03:28:57.408696Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.409345Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.413004Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-05T03:28:57.473735Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.474511Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.478269Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-05T03:28:57.539441Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.540145Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.543252Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0002] Task initiated on local node
[2026-06-05T03:28:57.604633Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.605324Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.608718Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-05T03:28:57.669862Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.670512Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.674012Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_015_chr16_0000] Task initiated on local node
[2026-06-05T03:28:57.735154Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.735783Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.739838Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-05T03:28:57.800540Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.801211Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.804828Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0003] Task initiated on local node
[2026-06-05T03:28:57.865973Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.866593Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.870844Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0005] Task initiated on local node
[2026-06-05T03:28:58.081757Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.082402Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.086006Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0000] Task initiated on local node
[2026-06-05T03:28:58.114909Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.115477Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.119148Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0003] Task initiated on local node
[2026-06-05T03:28:58.123612Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.124363Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.127788Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0001] Task initiated on local node
[2026-06-05T03:28:58.157127Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.157706Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.161135Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0003] Task initiated on local node
[2026-06-05T03:28:58.190238Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.190839Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.193414Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.194038Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-05T03:28:58.194598Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.194903Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.197064Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.198915Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0006] Task initiated on local node
[2026-06-05T03:28:58.200291Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-05T03:28:58.229408Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.230003Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.232805Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.233413Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0001] Task initiated on local node
[2026-06-05T03:28:58.234024Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.234318Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.235187Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.238520Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0002] Task initiated on local node
[2026-06-05T03:28:58.239544Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0004] Task initiated on local node
[2026-06-05T03:28:58.267858Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.268425Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.272147Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-05T03:28:58.333138Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.333247Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.333754Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.334231Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.337880Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0000] Task initiated on local node
[2026-06-05T03:28:58.339104Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0005] Task initiated on local node
[2026-06-05T03:28:58.398929Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.399513Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.402676Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-05T03:28:59.166086Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.166645Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.170051Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0006] Task initiated on local node
[2026-06-05T03:28:59.171085Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.171533Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.174284Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0005] Task initiated on local node
[2026-06-05T03:28:59.235692Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.235809Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.236317Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.236990Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.240885Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0004] Task initiated on local node
[2026-06-05T03:28:59.241849Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0001] Task initiated on local node
[2026-06-05T03:28:59.302976Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.303101Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.303560Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.308062Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0002] Task initiated on local node
[2026-06-05T03:28:59.368851Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.369326Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.372706Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0002] Task initiated on local node
[2026-06-05T03:28:59.433985Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.749293Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.749394Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.749816Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.750208Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.754511Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-05T03:28:59.755731Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-05T03:28:59.815739Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.815852Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.080598Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.081076Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.084355Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0002] Task initiated on local node
[2026-06-05T03:29:00.145630Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.145720Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.146131Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.149201Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0004] Task initiated on local node
[2026-06-05T03:29:00.179718Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.444441Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.444907Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.448209Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0001] Task initiated on local node
[2026-06-05T03:29:00.509617Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.024996Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.025467Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.028536Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0005] Task initiated on local node
[2026-06-05T03:29:01.089823Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.090107Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.090278Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.090666Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.091184Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.096506Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T03:29:01.097912Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T03:29:01.098707Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T03:29:01.123611Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.123999Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.127524Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T03:29:01.127882Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.127928Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.128132Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.131479Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T03:29:01.160664Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.160743Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.160944Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.163754Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T03:29:01.193295Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:05.016967Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T03:29:13.316015Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T03:29:13.316015Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] 
[2026-06-05T03:29:13.316015Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T03:29:13.316086Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] 
[2026-06-05T03:29:13.316095Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T03:29:13.316102Z] [nf-d3bfb0c1b5caaf019df00fedf7ea6f41-05a7d-hf8g9] [606_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec