[2026-06-05T03:28:44.590139Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T03:28:44.591524Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T03:28:44.591552Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T03:28:44.591561Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T03:28:44.591566Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXnO5dw0'
[2026-06-05T03:28:44.591570Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T03:28:44.591579Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T03:28:44.591583Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T03:28:44.591586Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] [RunParameters] memMb: 1547789
[2026-06-05T03:28:44.591590Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T03:28:44.591594Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T03:28:44.591597Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T03:28:44.591601Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T03:28:44.591605Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T03:28:44.592664Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T03:28:44.593016Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T03:28:44.601452Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T03:28:44.602655Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T03:28:44.602980Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T03:28:44.603254Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T03:28:44.603733Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.604342Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.604443Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.604515Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.604635Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.604984Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.605326Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.605587Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.605939Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.607555Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.609063Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.609575Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T03:28:44.609701Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.609835Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.610164Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.610749Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.610951Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.611034Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.611160Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.611229Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.611427Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.611590Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.611959Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.612028Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.612143Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.612205Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.612326Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.612393Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.612506Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.612576Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.612685Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.612756Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.612901Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.613062Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.613482Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.613564Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.613677Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.613744Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.613852Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.613911Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.614025Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.614088Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.614199Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.614264Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.614369Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.614435Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.614817Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.615139Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.615305Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.615370Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.615476Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.615539Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.615647Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.615712Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.615823Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.615882Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.615993Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.616057Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.616167Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.616461Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.616949Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.617018Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.617135Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.617198Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.617305Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.617371Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.617482Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.617542Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.618867Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.619066Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.619179Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.619247Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.619356Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.619423Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.621371Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.621906Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.622036Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.622106Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.622252Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.622321Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.622440Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.622502Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.622618Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.622681Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.622792Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.622862Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.622971Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.623053Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.623365Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.624054Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.624173Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.624241Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.624350Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.624418Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.626282Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.626425Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.626622Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.626686Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.642924Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.643026Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.643099Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.643372Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.643448Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.643561Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.643635Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.643770Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.643843Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.643892Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T03:28:44.646437Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.647254Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.647904Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.648928Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.650964Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.653153Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-05T03:28:44.653562Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.653865Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-05T03:28:44.654440Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.655175Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.658419Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T03:28:44.660620Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.661210Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T03:28:44.667192Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T03:28:44.669191Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T03:28:44.670785Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T03:28:44.671947Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-05T03:28:44.777721Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.777849Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.777876Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.777902Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.778892Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.779223Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.779819Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.780460Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.786666Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-05T03:28:44.789602Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-05T03:28:44.790054Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-05T03:28:44.790782Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-05T03:28:45.899752Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.899872Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.900906Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.901575Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.906405Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-05T03:28:45.907315Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-05T03:28:45.968153Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.968279Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.969356Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.970194Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.974240Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-05T03:28:45.975315Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-05T03:28:46.085623Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.085730Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.086780Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.087561Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.091780Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-05T03:28:46.092842Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T03:28:46.121617Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.122748Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.126242Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T03:28:46.155221Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.156340Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.160466Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T03:28:46.164678Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.165661Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.169268Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T03:28:46.230324Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.231416Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.233856Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.234820Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T03:28:46.234972Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.238174Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T03:28:46.299480Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.299591Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.299618Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.300611Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.300975Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.301650Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.305264Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-05T03:28:46.307373Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-05T03:28:46.308946Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-05T03:28:46.518809Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.519895Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.523418Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-05T03:28:46.584850Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.585965Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.589826Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-05T03:28:46.701288Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.702325Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.705816Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-05T03:28:46.767477Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.768491Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.771897Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T03:28:46.832915Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.834107Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.838158Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-05T03:28:46.898647Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.899867Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.903373Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T03:28:47.816697Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.817827Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.821478Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T03:28:47.882594Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.884040Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.888086Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-05T03:28:48.048975Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.050251Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.054228Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-05T03:28:48.114969Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.116272Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.120399Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-05T03:28:48.230850Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.232076Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.235502Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-05T03:28:48.296754Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.297713Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.301533Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-05T03:28:48.306156Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.307002Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.310187Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-05T03:28:48.421804Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.422728Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.426085Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-05T03:28:48.487507Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.488491Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.493171Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T03:28:48.603447Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.604494Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.607760Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T03:28:48.669555Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.670777Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.671109Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.673847Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.675093Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T03:28:48.677756Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-05T03:28:48.739477Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.740407Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.743805Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-05T03:28:48.805144Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.806303Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.809846Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T03:28:48.870786Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.870902Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.872035Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.872593Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.875945Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-05T03:28:48.877280Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-05T03:28:48.904848Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.905919Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.909361Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-05T03:28:48.913880Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.914906Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.918249Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-05T03:28:48.946983Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.948068Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.951212Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-05T03:28:49.012268Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.013373Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.017668Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-05T03:28:49.078359Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.079581Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.083596Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T03:28:49.144051Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.145017Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.148061Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T03:28:49.209469Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.210853Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.214823Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-05T03:28:49.275687Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.275781Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.276880Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.277439Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.281904Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-05T03:28:49.282130Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-05T03:28:49.342579Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.342689Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.343945Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.344425Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.348031Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-05T03:28:49.349975Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T03:28:49.409000Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.409102Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.410111Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.410704Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.414547Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-05T03:28:49.416172Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-05T03:28:49.475340Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.476460Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.480386Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-05T03:28:49.591259Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.592390Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.597589Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-05T03:28:50.309134Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.309928Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.313477Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-05T03:28:50.675580Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.676382Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.680077Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-05T03:28:51.041890Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.041995Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.042684Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.043427Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.047631Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-05T03:28:51.049668Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T03:28:51.108792Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.108908Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.108936Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.109609Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.110398Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.111250Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.116148Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-05T03:28:51.118453Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-05T03:28:51.120456Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T03:28:51.179593Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.179711Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.179738Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.180408Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.181199Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.183960Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.185142Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T03:28:51.188989Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T03:28:51.190825Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-05T03:28:51.202040Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.202679Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.205803Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-05T03:28:51.219031Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.219633Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.223042Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T03:28:51.223745Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.224343Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.227438Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T03:28:51.257028Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.257682Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.260210Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.260914Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.261732Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-05T03:28:51.264420Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-05T03:28:51.293505Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.294410Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.297803Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T03:28:51.302537Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.303123Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.306175Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T03:28:51.367581Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.367660Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.368233Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.368970Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.372471Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-05T03:28:51.374152Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-05T03:28:51.434998Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.435666Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.438688Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T03:28:51.500135Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.500794Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.504123Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T03:28:51.504804Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.505333Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.507922Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-05T03:28:51.569776Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.569867Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.570414Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.571144Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.574525Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-05T03:28:51.607971Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-05T03:28:51.636691Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.636765Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.637267Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.637999Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.641416Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T03:28:51.642401Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-05T03:28:51.702411Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.702500Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.703003Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.703326Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.706734Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T03:28:51.707778Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T03:28:51.768548Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.768633Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.933070Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.933686Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.937099Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-05T03:28:51.998366Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.413358Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.414006Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.416925Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-05T03:28:52.478300Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.742726Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.742811Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.743265Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.743955Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.747086Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-05T03:28:52.748132Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-05T03:28:52.809892Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.809959Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.274883Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.275347Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.278074Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-05T03:28:53.307374Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.028383Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.028834Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.031522Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-05T03:28:57.093105Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.093369Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.093488Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.093816Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.094556Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.098252Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T03:28:57.099801Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T03:28:57.100740Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T03:28:57.128013Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.128078Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.128266Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.128850Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.130924Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T03:28:57.131258Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.133531Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T03:28:57.163003Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.163061Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.163226Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.165718Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T03:28:57.195188Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.562980Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T03:29:17.711524Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T03:29:17.711524Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] 
[2026-06-05T03:29:17.711524Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T03:29:17.711600Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] 
[2026-06-05T03:29:17.711609Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T03:29:17.711617Z] [nf-9b0e2595ce47dd165e99e5fbfbcc799c-34ad6-f27qt] [590_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec