cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i Sig_18_tissue.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed Sig_18_tissue_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:162000001, elapsed 0.0s, est remaining 0.4s, peak mem 115MB, user 0.1s, sys 0.4s, output queue size 5
progress 10% @chr2:72000001, elapsed 0.0s, est remaining 0.4s, peak mem 115MB, user 0.2s, sys 0.9s, output queue size 1
progress 15% @chr2:234000001, elapsed 0.1s, est remaining 0.4s, peak mem 115MB, user 0.2s, sys 1.5s, output queue size 2
progress 20% @chr3:152000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.3s, sys 2.0s, output queue size 1
progress 25% @chr4:116000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.3s, sys 2.6s, output queue size 4
progress 30% @chr5:61000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.4s, sys 3.1s, output queue size 25
progress 35% @chr6:66000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.5s, sys 3.6s, output queue size 19
progress 40% @chr7:60000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 0.6s, sys 4.1s, output queue size 18
progress 45% @chr8:58000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 0.6s, sys 4.7s, output queue size 3
progress 50% @chr9:72000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 0.7s, sys 5.3s, output queue size 1
progress 55% @chr10:95000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 0.8s, sys 5.7s, output queue size 1
progress 60% @chr11:123000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 0.8s, sys 6.3s, output queue size 2
progress 65% @chr13:15000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 0.9s, sys 6.9s, output queue size 20
progress 70% @chr14:64000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 0.9s, sys 7.4s, output queue size 24
progress 75% @chr16:14000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 1.0s, sys 7.9s, output queue size 13
progress 80% @chr18:1000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 1.1s, sys 8.5s, output queue size 5
progress 85% @chr20:22000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 1.1s, sys 9.1s, output queue size 1
progress 90% @chrX:41000001, elapsed 0.4s, est remaining 0.0s, peak mem 142MB, user 1.3s, sys 9.4s, output queue size 114
progress 95% @chrY:41000001, elapsed 0.4s, est remaining 0.0s, peak mem 160MB, user 1.6s, sys 9.7s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.1s, est remaining 0.0s, peak mem 172MB, user 4.1s, sys 9.9s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: 1f8bfbff fffab20b
  extended: f1bf07ab 1a407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) Platinum 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50047052
reads: 1001838
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.520 user 5.177 sys 6.677 real
done: 1 calls 0.007 user 0.000 sys 0.011 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.000 sys 1.112 real
idle: 73 calls 0.013 user 0.021 sys 50.404 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 180731904 mem 4.707 user 10.664 sys 2.721 real