mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-hd7rb8t0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:32:06,318 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:32:07,326 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:32:07,528 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:32:08,616 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:32:08,777 - cnv_pipe.batch.run_model - INFO - Processing cluster 561 with 190 probes
2026-06-05 03:32:09,237 - cnv_pipe.batch.run_model.cluster561 - INFO - Child process started for cluster 561 with 190 probes
2026-06-05 03:33:15,299 - cnv_pipe.batch.run_model.cluster561 - INFO - Child process finished cluster 561. Wrote cluster_561_samples.csv and cluster_561_params.csv
2026-06-05 03:33:15,300 - cnv_pipe.batch.run_model - INFO - Cluster 561 finished in 66.52 seconds. Status: SUCCESS