File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f2/46be16ce1000073372571d5a1a667a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jb4_fky3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:14,748 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:15,567 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:15,740 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:16,641 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:16,715 - cnv_pipe.batch.run_model - INFO - Processing cluster 969 with 170 probes
2026-06-05 03:33:17,173 - cnv_pipe.batch.run_model.cluster969 - INFO - Child process started for cluster 969 with 170 probes
2026-06-05 03:34:07,081 - cnv_pipe.batch.run_model.cluster969 - INFO - Child process finished cluster 969. Wrote cluster_969_samples.csv and cluster_969_params.csv
2026-06-05 03:34:07,082 - cnv_pipe.batch.run_model - INFO - Cluster 969 finished in 50.37 seconds. Status: SUCCESS