mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d_ht2zuo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:30:43,843 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:30:44,818 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:30:45,011 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:30:46,051 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:30:46,207 - cnv_pipe.batch.run_model - INFO - Processing cluster 71 with 169 probes
2026-06-05 03:30:46,660 - cnv_pipe.batch.run_model.cluster71 - INFO - Child process started for cluster 71 with 169 probes
2026-06-05 03:31:46,007 - cnv_pipe.batch.run_model.cluster71 - INFO - Child process finished cluster 71. Wrote cluster_71_samples.csv and cluster_71_params.csv
2026-06-05 03:31:46,008 - cnv_pipe.batch.run_model - INFO - Cluster 71 finished in 59.80 seconds. Status: SUCCESS