File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/54/fbef2411879089d747000d01766cd4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mjkn_wks because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:34:03,484 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:34:04,380 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:34:04,560 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:34:05,563 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:34:05,639 - cnv_pipe.batch.run_model - INFO - Processing cluster 1267 with 186 probes
2026-06-05 03:34:06,158 - cnv_pipe.batch.run_model.cluster1267 - INFO - Child process started for cluster 1267 with 186 probes
2026-06-05 03:35:03,340 - cnv_pipe.batch.run_model.cluster1267 - INFO - Child process finished cluster 1267. Wrote cluster_1267_samples.csv and cluster_1267_params.csv
2026-06-05 03:35:03,344 - cnv_pipe.batch.run_model - INFO - Cluster 1267 finished in 57.71 seconds. Status: SUCCESS