cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/altera_v3_targets_coding_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_altera_v3_targets_coding_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:158000001, elapsed 0.0s, est remaining 0.5s, peak mem 102MB, user 0.1s, sys 0.4s, output queue size 16
progress 10% @chr2:56000001, elapsed 0.0s, est remaining 0.4s, peak mem 102MB, user 0.2s, sys 0.9s, output queue size 17
progress 15% @chr2:235000001, elapsed 0.1s, est remaining 0.4s, peak mem 102MB, user 0.2s, sys 1.5s, output queue size 16
progress 20% @chr3:155000001, elapsed 0.1s, est remaining 0.4s, peak mem 102MB, user 0.3s, sys 2.1s, output queue size 4
progress 25% @chr4:116000001, elapsed 0.1s, est remaining 0.3s, peak mem 102MB, user 0.4s, sys 2.7s, output queue size 17
progress 30% @chr5:84000001, elapsed 0.1s, est remaining 0.3s, peak mem 102MB, user 0.5s, sys 3.3s, output queue size 20
progress 35% @chr6:64000001, elapsed 0.2s, est remaining 0.3s, peak mem 102MB, user 0.5s, sys 3.8s, output queue size 5
progress 40% @chr7:37000001, elapsed 0.2s, est remaining 0.3s, peak mem 102MB, user 0.7s, sys 4.3s, output queue size 18
progress 45% @chr8:59000001, elapsed 0.2s, est remaining 0.2s, peak mem 102MB, user 0.8s, sys 4.9s, output queue size 11
progress 50% @chr9:73000001, elapsed 0.2s, est remaining 0.2s, peak mem 102MB, user 0.8s, sys 5.6s, output queue size 4
progress 55% @chr10:79000001, elapsed 0.2s, est remaining 0.2s, peak mem 102MB, user 0.9s, sys 6.2s, output queue size 16
progress 60% @chr11:117000001, elapsed 0.3s, est remaining 0.2s, peak mem 102MB, user 1.0s, sys 6.8s, output queue size 26
progress 65% @chr13:43000001, elapsed 0.3s, est remaining 0.2s, peak mem 102MB, user 1.2s, sys 8.1s, output queue size 15
progress 70% @chr14:63000001, elapsed 0.4s, est remaining 0.2s, peak mem 102MB, user 1.2s, sys 9.3s, output queue size 24
progress 75% @chr16:38000001, elapsed 0.4s, est remaining 0.1s, peak mem 102MB, user 1.4s, sys 10.6s, output queue size 16
progress 80% @chr18:21000001, elapsed 0.4s, est remaining 0.1s, peak mem 102MB, user 1.4s, sys 11.8s, output queue size 11
progress 85% @chr20:17000001, elapsed 0.5s, est remaining 0.1s, peak mem 102MB, user 1.5s, sys 13.1s, output queue size 7
progress 90% @chrX:31000001, elapsed 0.6s, est remaining 0.1s, peak mem 111MB, user 2.0s, sys 14.0s, output queue size 114
progress 95% @chrY:52000001, elapsed 0.6s, est remaining 0.0s, peak mem 126MB, user 2.5s, sys 15.2s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.9s, est remaining 0.0s, peak mem 150MB, user 3.4s, sys 17.1s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395343
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.177 user 9.110 sys 10.391 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.000 user 0.004 sys 0.937 real
idle: 72 calls 0.003 user 0.023 sys 38.518 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 157442048 mem 3.566 user 17.600 sys 2.085 real