Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/4080f349257bd649c0918760ed9724/.command.sh
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/8cbb0d678506e322fe573f22da46e2/Sig_18_tissue.recalibrated.bam
Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/8cbb0d678506e322fe573f22da46e2/Sig_18_tissue.recalibrated.bam.bai
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/4080f349257bd649c0918760ed9724/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
==> STAGING COMPLETE (10 inputs)
Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:
/var/tmp/strelka/runWorkflow.py
[2026-06-05T03:28:41.026135Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T03:28:41.027397Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T03:28:41.027411Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T03:28:41.027416Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T03:28:41.027420Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXl8t9QV'
[2026-06-05T03:28:41.027425Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T03:28:41.027430Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T03:28:41.027434Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T03:28:41.027439Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] [RunParameters] memMb: 761785
[2026-06-05T03:28:41.027443Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T03:28:41.027448Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T03:28:41.027452Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T03:28:41.027456Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T03:28:41.027461Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T03:28:41.027930Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T03:28:41.028053Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T03:28:41.034039Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T03:28:41.034899Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T03:28:41.035515Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T03:28:41.035752Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T03:28:41.036026Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.036778Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.036891Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.036964Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.037100Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.037390Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.037737Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.037883Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.038045Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.038717Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.038901Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.040920Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.041325Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.041579Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T03:28:41.041660Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.041737Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.041862Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.041928Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.042040Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.042108Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.042299Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.042386Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.042656Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.042964Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.043079Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.043141Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.043259Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.043347Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.043470Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.043570Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.043681Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.043769Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.043886Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.043966Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.044148Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.044334Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.044776Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.045136Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.045251Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.045337Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.045458Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.045526Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.045641Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.045707Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.045816Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.045879Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.045995Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.046065Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.046366Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.046751Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.046864Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.046931Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.047040Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.047109Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.047219Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.047297Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.047414Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.047480Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.047589Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.047652Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.047903Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.048094Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.048591Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.048678Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.048788Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.048868Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.048980Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.049040Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.049150Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.049220Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.049329Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.049392Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.049499Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.049633Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.052240Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.052308Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.052422Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.052488Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.052593Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.052657Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.052768Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.052830Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.052944Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.053006Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.053116Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.053272Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.054069Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.054144Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.054253Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.054318Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.054432Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.054499Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.054607Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.054669Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.054781Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.054844Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.054957Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.055018Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.072877Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.073209Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.073357Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.074354Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.074566Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.074859Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.075203Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.075789Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.076048Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.076490Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.076900Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.077344Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.078183Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.078759Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.079281Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.079738Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:41.080663Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.081436Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T03:28:41.082388Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.086175Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-05T03:28:41.087539Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T03:28:41.091021Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-05T03:28:41.094611Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-05T03:28:41.099331Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-05T03:28:41.099750Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-05T03:28:41.102369Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T03:28:41.103832Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-05T03:28:41.167545Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.168622Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.171863Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-05T03:28:41.176534Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.177513Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.180132Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T03:28:41.241689Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.241784Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.242873Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.243191Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.246242Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T03:28:41.247321Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-05T03:28:41.809109Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.810222Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.813238Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-05T03:28:41.874972Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.876151Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.878828Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-05T03:28:41.940344Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.941412Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.944599Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T03:28:41.957881Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.958902Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.962086Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-05T03:28:42.023992Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.025086Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.027887Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-05T03:28:42.491118Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.492214Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.495544Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-05T03:28:42.606818Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.607759Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.610498Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-05T03:28:42.822749Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.823904Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.826646Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-05T03:28:42.839726Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.840725Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.847885Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-05T03:28:42.904962Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.906086Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.909061Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-05T03:28:42.910229Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.911073Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.913627Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-05T03:28:42.943182Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.944270Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.947005Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T03:28:43.008737Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.009770Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.012760Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-05T03:28:43.042014Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.043037Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.045775Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-05T03:28:43.207808Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.208720Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.211935Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-05T03:28:43.373801Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.374851Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.377588Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T03:28:43.439047Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.440153Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.443375Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-05T03:28:43.905588Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.906560Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.909179Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-05T03:28:43.938547Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.939598Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.942444Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T03:28:44.003871Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.003962Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.003987Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.004885Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.005148Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.005368Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.008478Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-05T03:28:44.010902Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T03:28:44.011732Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-05T03:28:44.023034Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.024017Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.026926Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-05T03:28:44.040116Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.041051Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.043570Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T03:28:44.056948Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.057835Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.061085Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-05T03:28:44.073641Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.074528Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.077035Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-05T03:28:44.138647Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.138748Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.139728Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.140101Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.143281Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-05T03:28:44.144580Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-05T03:28:44.172540Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.173484Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.176421Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-05T03:28:44.388541Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.389527Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.392057Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-05T03:28:44.421739Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.422729Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.425198Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-05T03:28:44.454812Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.455741Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.458558Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T03:28:44.519984Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.520903Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.523723Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-05T03:28:44.585520Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.586477Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.589041Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T03:28:44.650886Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.651846Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.654724Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-05T03:28:44.716150Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.717094Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.720322Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-05T03:28:44.831758Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.832691Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.835580Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-05T03:28:44.896859Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.896953Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.897800Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.898155Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.900860Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-05T03:28:44.901679Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-05T03:28:44.930453Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.931327Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.933931Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T03:28:44.947179Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.948035Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.950810Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-05T03:28:45.012218Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.012334Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.013164Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.013486Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.016347Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-05T03:28:45.017052Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-05T03:28:45.045875Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.047033Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.047300Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.049848Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.050250Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-05T03:28:45.053007Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-05T03:28:45.265057Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.265985Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.268770Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T03:28:45.298050Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.298823Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.301553Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-05T03:28:45.363031Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.363899Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.366717Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-05T03:28:45.396090Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.396915Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.399896Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T03:28:45.461421Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.462229Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.465276Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-05T03:28:45.526475Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.527303Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.530614Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-05T03:28:45.559941Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.560782Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.563718Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T03:28:45.576699Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.577429Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.579963Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T03:28:45.609353Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.610115Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.610666Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.612586Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.613462Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-05T03:28:45.615658Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-05T03:28:45.616500Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.617106Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.619442Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-05T03:28:45.681209Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.681296Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.682008Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.682400Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.685443Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-05T03:28:45.686376Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T03:28:45.714655Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.714746Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.715478Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.715806Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.718221Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-05T03:28:45.719254Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-05T03:28:45.748200Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.748937Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.751697Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T03:28:45.756818Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.757663Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.758141Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.760328Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.760617Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-05T03:28:45.763033Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T03:28:45.792531Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.792635Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.793282Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.793597Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.796486Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T03:28:45.797462Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-05T03:28:45.809846Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.810543Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.813173Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T03:28:45.826446Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.827132Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.830540Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-05T03:28:45.843158Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.843857Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.846603Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T03:28:45.875902Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.876580Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.879818Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-05T03:28:46.041137Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.041772Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.044447Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-05T03:28:46.073913Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.074605Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.077744Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-05T03:28:46.138693Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.138810Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.139433Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.139919Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.143309Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-05T03:28:46.143530Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-05T03:28:46.173040Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.173145Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.173762Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.174055Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.176903Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T03:28:46.178002Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-05T03:28:46.238355Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.238458Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.239068Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.239604Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.242154Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-05T03:28:46.243292Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-05T03:28:46.304197Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.304297Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.304868Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.305194Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.308188Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T03:28:46.308714Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-05T03:28:46.338201Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.338290Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.338815Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.341625Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-05T03:28:46.342672Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.374761Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.739804Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.740346Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.743073Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-05T03:28:46.772383Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.936765Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.937295Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.939951Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-05T03:28:47.001606Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.266321Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.266408Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.266882Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.267189Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.270013Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-05T03:28:47.270794Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-05T03:28:47.299365Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.299434Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.315336Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.315829Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.318174Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-05T03:28:47.348090Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.348407Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.348559Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.349101Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.349305Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.352949Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T03:28:47.354254Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T03:28:47.355255Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T03:28:47.381986Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.382069Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.382091Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.382312Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.382695Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.385138Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T03:28:47.386410Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T03:28:47.414697Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.414789Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.415020Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.417487Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T03:28:47.447022Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.671830Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T03:28:59.915897Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T03:28:59.915897Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner]
[2026-06-05T03:28:59.915897Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] workflow version: 2.9.10
[2026-06-05T03:28:59.915951Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner]
[2026-06-05T03:28:59.915958Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T03:28:59.915964Z] [nf-a44080f349257bd649c0918760ed9724-e4fb5-whsb6] [582_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec