File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ab/ba0c4fbfc5e0bb5eff971f2708f928/.command.err
Size
100.8 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr6_138229684-138229952.bed)
Attempt

Content

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[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUuFbLB/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUuFbLB/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUuFbLB/chr6_138229684-138229952.bed.gz.tbi
[2026-06-05T03:28:44.706961Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T03:28:44.708031Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T03:28:44.708062Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T03:28:44.708069Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T03:28:44.708074Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXUuFbLB'
[2026-06-05T03:28:44.708078Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T03:28:44.708084Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T03:28:44.708088Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T03:28:44.708092Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] [RunParameters] memMb: 1547789
[2026-06-05T03:28:44.708096Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T03:28:44.708099Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T03:28:44.708103Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T03:28:44.708107Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T03:28:44.708110Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T03:28:44.709141Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T03:28:44.709211Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T03:28:44.715160Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T03:28:44.715823Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T03:28:44.716116Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T03:28:44.716590Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T03:28:44.716910Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.717568Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.717675Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.717747Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.718026Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.718281Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.718629Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.718678Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.718945Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.719560Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.721345Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.722211Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.722362Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.722612Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T03:28:44.722673Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.722767Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.723046Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.723332Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.723448Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.723511Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.723719Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.723791Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.723900Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.723965Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.724074Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.724135Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.724248Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.724313Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.724560Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.724823Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.724931Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.724994Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.725115Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.725177Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.725285Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.725346Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.725490Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.725551Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.725658Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.725718Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.725838Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.725955Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.726424Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.726491Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.726594Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.726656Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.726765Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.726875Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.726988Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.727097Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.727208Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.727274Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.727400Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.727615Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.728053Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.728114Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.728258Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.728328Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.728431Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.728499Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.728614Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.728675Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.728786Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.728851Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.728953Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.729040Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.729377Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.729881Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.729994Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.730056Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.730162Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.730224Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.730328Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.730389Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.731876Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.732495Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.732621Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.732689Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.732804Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.732869Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.732974Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.733037Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.733147Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.733208Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.733315Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.733380Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.733600Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.734252Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.734364Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.734427Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.734537Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.734597Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.734701Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.734762Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.734874Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.734931Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.735042Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.735101Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.735208Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.735319Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.736143Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.736207Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.736315Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.736376Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.736482Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.736547Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.736649Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.736711Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.736818Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.736878Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.739327Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.740080Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.740344Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.740409Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.753689Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.754672Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.754812Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.755656Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.756083Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.756285Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.756375Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.756632Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.756891Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.756997Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.757216Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.757624Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.758538Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.758885Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:44.759312Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.759783Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T03:28:44.760860Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.761784Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.762667Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.767789Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-05T03:28:44.772086Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-05T03:28:44.776233Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-05T03:28:44.778978Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-05T03:28:44.780262Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-05T03:28:44.782851Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-05T03:28:44.786927Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-05T03:28:44.787992Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-05T03:28:45.955314Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.955433Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.956535Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.957308Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.960920Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T03:28:45.962493Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-05T03:28:46.022391Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.023770Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.026565Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.027601Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-05T03:28:46.028250Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.031297Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T03:28:46.092595Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.093894Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.097076Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-05T03:28:46.308756Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.308860Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.308888Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.310064Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.310717Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.311268Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.313839Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-05T03:28:46.317104Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T03:28:46.318440Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-05T03:28:46.378098Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.378224Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.379414Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.379710Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.383488Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-05T03:28:46.385029Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-05T03:28:46.594908Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.596516Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.600382Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-05T03:28:46.761613Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.763380Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.767201Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-05T03:28:46.928179Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.929610Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.932948Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-05T03:28:47.044271Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.045457Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.049608Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T03:28:47.160288Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.161530Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.164967Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-05T03:28:47.226196Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.227410Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.231182Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-05T03:28:47.493063Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.493179Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.494419Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.495187Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.499297Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-05T03:28:47.503329Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-05T03:28:47.562563Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.563815Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.567955Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-05T03:28:47.628789Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.630050Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.633351Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-05T03:28:47.694662Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.695903Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.699493Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-05T03:28:47.760587Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.761836Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.765145Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-05T03:28:47.877075Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.878312Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.881803Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-05T03:28:47.942876Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.944187Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.947406Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T03:28:48.008769Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.009961Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.013293Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-05T03:28:48.074818Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.076073Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.079249Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-05T03:28:48.142121Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.143323Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.146727Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-05T03:28:48.207962Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.209108Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.212522Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-05T03:28:48.273978Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.275206Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.278338Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-05T03:28:48.339884Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.340988Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.344300Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-05T03:28:48.555937Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.557055Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.560206Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-05T03:28:48.565189Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.566228Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.568917Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.569660Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T03:28:48.570217Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.573319Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-05T03:28:48.602594Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.603837Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.607431Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T03:28:48.636713Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.637783Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.641719Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-05T03:28:48.670369Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.671456Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.675290Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-05T03:28:48.675907Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.676829Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.679778Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-05T03:28:48.741294Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.742238Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.745836Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-05T03:28:48.746381Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.747295Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.750314Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T03:28:49.413230Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.414421Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.417745Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-05T03:28:49.528858Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.529935Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.533473Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T03:28:49.594861Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.595918Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.600111Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-05T03:28:50.012137Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.012250Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.013182Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.013537Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.017633Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-05T03:28:50.018924Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-05T03:28:50.080202Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.081250Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.085002Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-05T03:28:50.397030Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.397174Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.398654Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.399114Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.403298Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T03:28:50.765342Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.766305Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.769724Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-05T03:28:50.830928Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.831940Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.834960Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-05T03:28:50.896133Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.897049Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.899972Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-05T03:28:50.913252Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.914246Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.917082Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T03:28:50.922255Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.923130Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.925888Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-05T03:28:50.939173Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.940290Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.943287Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-05T03:28:50.956246Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.957174Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.961053Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-05T03:28:50.961337Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.962178Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.966410Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T03:28:50.978951Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.979855Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.983602Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-05T03:28:51.012638Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.013649Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.017921Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T03:28:51.022463Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.023357Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.027484Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-05T03:28:51.057247Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.058164Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.062116Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-05T03:28:51.066641Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.067499Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.070804Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T03:28:51.132177Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.133106Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.136671Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T03:28:51.165629Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.166584Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.170397Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-05T03:28:51.174778Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.175634Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.179245Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-05T03:28:51.207914Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.208810Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.212006Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T03:28:51.216875Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.217842Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.218587Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.219704Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.223346Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-05T03:28:51.224568Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T03:28:51.254274Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.255086Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.258242Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T03:28:51.319518Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.320388Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.323326Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-05T03:28:51.384579Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.385440Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.388745Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T03:28:51.451568Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.452413Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.455590Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-05T03:28:51.517160Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.518027Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.521254Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-05T03:28:51.582664Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.583503Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.586851Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-05T03:28:51.641130Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T03:28:51.648177Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.648276Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.648309Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.649049Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.649761Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.652097Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.652314Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T03:28:51.655986Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-05T03:28:51.657124Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-05T03:28:51.716797Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.717678Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.721718Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-05T03:28:51.832553Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.833353Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.836748Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-05T03:28:51.897890Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.898662Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.901917Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-05T03:28:51.963355Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.964199Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.967217Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T03:28:52.028461Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.029190Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.032308Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-05T03:28:52.093655Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.094385Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.097642Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-05T03:28:52.158948Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.159694Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.162871Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-05T03:28:52.224276Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.224986Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.228137Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-05T03:28:52.289255Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.289350Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.289987Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.290660Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.293750Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-05T03:28:52.294870Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T03:28:52.356066Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.356150Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.356773Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.358592Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.359348Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T03:28:52.362246Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T03:28:52.367126Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.367703Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.370533Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T03:28:52.399692Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.399797Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.400365Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.400954Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.402918Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T03:28:52.405789Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-05T03:28:52.434806Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.434899Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.434937Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.435484Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.436298Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.438528Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.440144Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-05T03:28:52.440979Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.441504Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-05T03:28:52.443385Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.444413Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T03:28:52.447827Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-05T03:28:52.460614Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.461228Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.464162Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-05T03:28:52.477172Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.477515Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.477581Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.478089Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.478716Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.479290Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.482184Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-05T03:28:52.484614Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T03:28:52.487504Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T03:28:52.499968Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.500525Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.503489Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-05T03:28:52.532545Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.532617Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.533080Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.535063Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.536307Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-05T03:28:52.542874Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.543290Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.545724Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T03:28:52.576345Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.576419Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.740689Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.741173Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:52.744195Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-05T03:28:52.806469Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.020956Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.021433Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.024046Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-05T03:28:53.054626Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.268971Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.269434Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.272848Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-05T03:28:53.334248Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.342036Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.342492Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.345492Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-05T03:28:53.406666Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.407001Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.407155Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.407800Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.409285Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.411668Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T03:28:53.414565Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T03:28:53.415748Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T03:28:53.443389Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.443474Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.443738Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.444194Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.447756Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.448425Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T03:28:53.478011Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T03:28:53.480537Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.480609Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.480818Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:28:53.483222Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T03:28:53.513969Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.332124Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T03:29:03.597441Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T03:29:03.597441Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] 
[2026-06-05T03:29:03.597441Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T03:29:03.597515Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] 
[2026-06-05T03:29:03.597522Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T03:29:03.597530Z] [nf-abba0c4fbfc5e0bb5eff971f2708f928-db4f6-k9ngc] [621_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec