File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f0/66a68bd803b941d3c60fe6cd70ae43/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-mg3hffjo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:32:31,347 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:32:32,135 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:32:32,301 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:32:33,320 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:32:33,535 - cnv_pipe.batch.run_model - INFO - Processing cluster 579 with 199 probes
2026-06-05 03:32:33,916 - cnv_pipe.batch.run_model.cluster579 - INFO - Child process started for cluster 579 with 199 probes
2026-06-05 03:33:32,314 - cnv_pipe.batch.run_model.cluster579 - INFO - Child process finished cluster 579. Wrote cluster_579_samples.csv and cluster_579_params.csv
2026-06-05 03:33:32,315 - cnv_pipe.batch.run_model - INFO - Cluster 579 finished in 58.78 seconds. Status: SUCCESS