cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:166000001, elapsed 0.0s, est remaining 0.6s, peak mem 111MB, user 0.2s, sys 0.4s, output queue size 6
progress 10% @chr2:81000001, elapsed 0.1s, est remaining 0.5s, peak mem 111MB, user 0.4s, sys 1.1s, output queue size 33
progress 15% @chr2:239000001, elapsed 0.1s, est remaining 0.5s, peak mem 111MB, user 0.6s, sys 1.8s, output queue size 19
progress 20% @chr3:155000001, elapsed 0.1s, est remaining 0.5s, peak mem 111MB, user 0.8s, sys 2.5s, output queue size 6
progress 25% @chr4:121000001, elapsed 0.1s, est remaining 0.4s, peak mem 111MB, user 1.0s, sys 3.0s, output queue size 18
progress 30% @chr5:81000001, elapsed 0.2s, est remaining 0.4s, peak mem 111MB, user 1.1s, sys 3.7s, output queue size 5
progress 35% @chr6:69000001, elapsed 0.2s, est remaining 0.4s, peak mem 111MB, user 1.5s, sys 4.5s, output queue size 21
progress 40% @chr7:55000001, elapsed 0.3s, est remaining 0.4s, peak mem 111MB, user 1.7s, sys 5.6s, output queue size 16
progress 45% @chr8:27000001, elapsed 0.3s, est remaining 0.4s, peak mem 111MB, user 1.9s, sys 6.6s, output queue size 30
progress 50% @chr9:75000001, elapsed 0.3s, est remaining 0.3s, peak mem 111MB, user 2.2s, sys 7.7s, output queue size 14
progress 55% @chr10:94000001, elapsed 0.4s, est remaining 0.3s, peak mem 111MB, user 2.3s, sys 8.9s, output queue size 20
progress 60% @chr11:93000001, elapsed 0.4s, est remaining 0.3s, peak mem 111MB, user 2.5s, sys 9.9s, output queue size 40
progress 65% @chr13:10000001, elapsed 0.5s, est remaining 0.2s, peak mem 111MB, user 2.7s, sys 11.0s, output queue size 20
progress 70% @chr14:53000001, elapsed 0.5s, est remaining 0.2s, peak mem 111MB, user 2.8s, sys 12.1s, output queue size 20
progress 75% @chr16:15000001, elapsed 0.5s, est remaining 0.2s, peak mem 111MB, user 3.0s, sys 13.0s, output queue size 24
progress 80% @chr17:80000001, elapsed 0.6s, est remaining 0.1s, peak mem 111MB, user 3.3s, sys 13.9s, output queue size 30
progress 85% @chr20:21000001, elapsed 0.6s, est remaining 0.1s, peak mem 111MB, user 3.4s, sys 15.0s, output queue size 31
progress 90% @chrX:49000001, elapsed 0.7s, est remaining 0.1s, peak mem 123MB, user 4.1s, sys 15.8s, output queue size 114
progress 95% @chrY:30000001, elapsed 0.7s, est remaining 0.0s, peak mem 135MB, user 4.7s, sys 16.7s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.3s, est remaining 0.0s, peak mem 159MB, user 6.1s, sys 18.2s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813895
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.362 user 9.069 sys 11.333 real
done: 1 calls 0.006 user 0.000 sys 0.011 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.006 user 0.002 sys 1.267 real
idle: 81 calls 0.009 user 0.018 sys 44.637 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 166879232 mem 6.726 user 18.914 sys 2.845 real