mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-apxtd7tb because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:34:08,315 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:34:09,132 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:34:09,305 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:34:10,210 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:34:10,365 - cnv_pipe.batch.run_model - INFO - Processing cluster 1300 with 189 probes
2026-06-05 03:34:10,740 - cnv_pipe.batch.run_model.cluster1300 - INFO - Child process started for cluster 1300 with 189 probes
2026-06-05 03:35:05,488 - cnv_pipe.batch.run_model.cluster1300 - INFO - Child process finished cluster 1300. Wrote cluster_1300_samples.csv and cluster_1300_params.csv
2026-06-05 03:35:05,489 - cnv_pipe.batch.run_model - INFO - Cluster 1300 finished in 55.12 seconds. Status: SUCCESS