mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-263xwls9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:30:39,002 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:30:39,853 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:30:40,020 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:30:40,966 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:30:41,128 - cnv_pipe.batch.run_model - INFO - Processing cluster 48 with 197 probes
2026-06-05 03:30:41,504 - cnv_pipe.batch.run_model.cluster48 - INFO - Child process started for cluster 48 with 197 probes
2026-06-05 03:31:40,785 - cnv_pipe.batch.run_model.cluster48 - INFO - Child process finished cluster 48. Wrote cluster_48_samples.csv and cluster_48_params.csv
2026-06-05 03:31:40,787 - cnv_pipe.batch.run_model - INFO - Cluster 48 finished in 59.66 seconds. Status: SUCCESS