File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/65a9d91255a2332858b2db8b07ff46/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xo61t_f4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:20,406 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:21,198 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:21,364 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:22,288 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:22,457 - cnv_pipe.batch.run_model - INFO - Processing cluster 1011 with 191 probes
2026-06-05 03:33:22,828 - cnv_pipe.batch.run_model.cluster1011 - INFO - Child process started for cluster 1011 with 191 probes
2026-06-05 03:34:18,354 - cnv_pipe.batch.run_model.cluster1011 - INFO - Child process finished cluster 1011. Wrote cluster_1011_samples.csv and cluster_1011_params.csv
2026-06-05 03:34:18,356 - cnv_pipe.batch.run_model - INFO - Cluster 1011 finished in 55.90 seconds. Status: SUCCESS