File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3c/21ebc0898346383ff2857591ecca84/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_d_2paz1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:50,192 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:51,009 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:51,181 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:52,162 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:52,362 - cnv_pipe.batch.run_model - INFO - Processing cluster 1191 with 192 probes
2026-06-05 03:33:52,767 - cnv_pipe.batch.run_model.cluster1191 - INFO - Child process started for cluster 1191 with 192 probes
2026-06-05 03:34:49,578 - cnv_pipe.batch.run_model.cluster1191 - INFO - Child process finished cluster 1191. Wrote cluster_1191_samples.csv and cluster_1191_params.csv
2026-06-05 03:34:49,580 - cnv_pipe.batch.run_model - INFO - Cluster 1191 finished in 57.22 seconds. Status: SUCCESS