File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/1523bde418e3e99ec595b97a6ba830/.command.log
Size
89.4 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr12_102480219-102480663.bed)
Attempt

Content

View in new tab 
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/c1b7d2a298a8b5bbba54ad67dec5b6/HCC1395_tumor.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/1523bde418e3e99ec595b97a6ba830/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d1/c1b7d2a298a8b5bbba54ad67dec5b6/HCC1395_tumor.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/1523bde418e3e99ec595b97a6ba830/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-05T03:28:40.721982Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T03:28:40.722504Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T03:28:40.722518Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T03:28:40.722523Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T03:28:40.722529Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXU7XqPU'
[2026-06-05T03:28:40.722534Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T03:28:40.722541Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T03:28:40.722545Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T03:28:40.722550Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] [RunParameters] memMb: 1523801
[2026-06-05T03:28:40.722561Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T03:28:40.722566Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T03:28:40.722573Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T03:28:40.722578Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T03:28:40.722584Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T03:28:40.723078Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T03:28:40.723216Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T03:28:40.730603Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T03:28:40.731513Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T03:28:40.731674Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T03:28:40.731921Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T03:28:40.732207Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.733174Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.733292Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.733388Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.733760Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.734075Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.734161Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.734451Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.734815Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.735240Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.735396Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.737657Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.738190Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.738547Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T03:28:40.738848Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.738996Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.739233Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.739588Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.739926Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.740007Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.740256Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.740344Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.740485Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.740569Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.740710Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.740788Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.740969Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.741112Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.741534Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.741621Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.741783Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.741874Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.742013Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.742088Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.742223Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.742303Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.742438Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.742574Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.743128Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.743208Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.743351Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.743429Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.743566Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.743645Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.743778Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.743855Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.743998Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.744197Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.744464Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.744934Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.745344Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.745756Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.746065Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.746656Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.747375Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.747476Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.747633Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.747724Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.747871Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.747955Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.748101Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.748179Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.748511Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.749029Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.749204Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.749340Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.749497Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.749585Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.749748Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.749831Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.749977Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.750118Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.750907Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.750990Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.753045Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.753682Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.753855Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.753949Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.754088Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.754173Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.754360Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.754436Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.754581Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.754660Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.754908Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.755708Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.755894Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.755997Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.756144Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.756228Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.756373Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.756460Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.756599Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.756829Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.757739Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.757826Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.757978Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.758056Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.772170Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.777846Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.778826Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.779047Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.779143Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.779560Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.780408Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.780660Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.781111Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.781351Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.781913Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.782145Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.782688Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.783097Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.783704Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.784746Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.784973Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.786008Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:40.789197Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-05T03:28:40.792402Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-05T03:28:40.795296Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-05T03:28:40.798331Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T03:28:40.801484Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-05T03:28:40.805350Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T03:28:40.806218Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T03:28:40.809363Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-05T03:28:40.885615Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-05T03:28:40.924049Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.924125Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.924152Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.924174Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.925257Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.925607Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.925978Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.926356Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:40.933307Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-05T03:28:40.933928Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T03:28:40.936881Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-05T03:28:41.044086Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.045312Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.050114Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T03:28:41.260072Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.261276Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.264071Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-05T03:28:41.325278Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.326492Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.329459Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-05T03:28:41.390540Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.391742Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.395005Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T03:28:41.506116Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.507328Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:41.510943Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-05T03:28:42.122774Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.124422Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.128085Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-05T03:28:42.940346Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.942104Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:42.945041Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-05T03:28:43.006332Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.006422Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.008048Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.008398Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.012216Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-05T03:28:43.013717Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-05T03:28:43.123582Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.125405Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.128709Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-05T03:28:43.189725Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.192149Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.194580Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.196001Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-05T03:28:43.196946Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.200136Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-05T03:28:43.261048Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.262838Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.266467Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T03:28:43.327265Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.328906Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.331863Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-05T03:28:43.393205Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.395205Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.398442Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-05T03:28:43.810304Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.811444Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:43.814762Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-05T03:28:44.059898Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-05T03:28:44.076095Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.076171Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.076213Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.077293Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.077626Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.078052Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.081903Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-05T03:28:44.084816Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-05T03:28:44.086187Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T03:28:44.144007Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.145123Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.148427Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-05T03:28:44.148961Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.150032Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.152857Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-05T03:28:44.213991Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.214088Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.215149Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.215504Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.218976Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-05T03:28:44.220115Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T03:28:44.279833Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.280932Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.284203Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-05T03:28:44.284865Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.285906Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.288763Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-05T03:28:44.317881Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.318917Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.322717Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.323086Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T03:28:44.323974Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.326653Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-05T03:28:44.387988Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.388077Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.389157Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.389547Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.393102Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-05T03:28:44.394180Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-05T03:28:44.454033Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.455075Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.458680Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-05T03:28:44.920472Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.921527Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.924822Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-05T03:28:44.985609Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.987158Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.987443Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.988827Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:44.992304Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-05T03:28:44.993565Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-05T03:28:45.455770Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.456803Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.460112Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-05T03:28:45.520941Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.521980Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.525376Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T03:28:45.636321Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.636408Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.637371Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.637655Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.641346Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-05T03:28:45.642729Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-05T03:28:45.669966Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.670056Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.670961Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.671256Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.674625Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-05T03:28:45.675298Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.675995Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-05T03:28:45.676702Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.679213Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-05T03:28:45.708586Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.709997Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.710270Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.712879Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.713578Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-05T03:28:45.716109Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-05T03:28:45.744960Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.745778Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.747916Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.748982Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.749363Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-05T03:28:45.751722Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-05T03:28:45.812946Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.813035Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.813897Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.814264Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.817385Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-05T03:28:45.818559Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T03:28:45.878732Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.879691Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.880089Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.881437Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:45.884986Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-05T03:28:46.120337Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-05T03:28:46.146124Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.146206Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.147067Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.147386Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.151366Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-05T03:28:46.152493Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-05T03:28:46.212454Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.213328Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.215636Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.216600Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.216788Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T03:28:46.219517Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-05T03:28:46.280656Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.280718Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.281446Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.281726Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.285758Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-05T03:28:46.286836Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-05T03:28:46.445962Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.446698Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.449847Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-05T03:28:46.511002Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.511870Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.514935Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-05T03:28:46.626096Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.626979Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.630587Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-05T03:28:46.791536Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.792369Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.795630Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-05T03:28:46.856461Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.857286Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.860494Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-05T03:28:46.921464Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.922305Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.925202Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-05T03:28:46.938226Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.939014Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.942122Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-05T03:28:46.954935Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.955706Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:46.958640Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-05T03:28:47.620837Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.621613Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.624320Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-05T03:28:47.685431Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.686132Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.689031Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-05T03:28:47.717965Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.718665Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.722096Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-05T03:28:47.932904Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.933654Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.936638Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-05T03:28:47.997748Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:47.999062Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.002249Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-05T03:28:48.031418Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.031596Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.032626Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.032976Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.036363Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-05T03:28:48.038974Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-05T03:28:48.067991Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.069216Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.069633Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.070679Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.074067Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-05T03:28:48.075166Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-05T03:28:48.135387Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.136979Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.137394Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.138475Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.141915Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-05T03:28:48.143176Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-05T03:28:48.202693Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.202809Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.203784Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.204157Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.206964Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T03:28:48.208020Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-05T03:28:48.268401Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.268486Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.269523Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.270173Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.273542Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-05T03:28:48.274396Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-05T03:28:48.334323Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.334410Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.335021Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.338131Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-05T03:28:48.599494Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.600166Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.603034Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-05T03:28:48.664209Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.728257Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.728871Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.731608Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-05T03:28:48.760794Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.924898Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.925418Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:48.928340Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-05T03:28:48.957130Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.071211Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.071793Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.075031Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-05T03:28:49.135842Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.350091Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.350657Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.353180Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-05T03:28:49.382382Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.496437Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.496980Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:49.499588Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-05T03:28:49.528689Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.694260Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.694867Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.697586Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-05T03:28:50.726704Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.727022Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.727165Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.727365Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.727794Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.732502Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T03:28:50.735412Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T03:28:50.736458Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T03:28:50.759910Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.759958Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.760179Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.760436Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.763347Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T03:28:50.764233Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.764375Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T03:28:50.795897Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.795936Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.796101Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:28:50.798435Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T03:28:50.827762Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:51.342093Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T03:28:59.610613Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T03:28:59.610613Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] 
[2026-06-05T03:28:59.610613Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T03:28:59.610666Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] 
[2026-06-05T03:28:59.610675Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T03:28:59.610683Z] [nf-551523bde418e3e99ec595b97a6ba830-19a43-4cdsd] [849_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec