File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/72/618f7df09cb659c11db72a86a0e539/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-d8phgb3b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:30,906 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:32,213 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:32,494 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:34,182 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:34,435 - cnv_pipe.batch.run_model - INFO - Processing cluster 791 with 200 probes
2026-06-05 03:33:35,053 - cnv_pipe.batch.run_model.cluster791 - INFO - Child process started for cluster 791 with 200 probes
2026-06-05 03:35:11,074 - cnv_pipe.batch.run_model.cluster791 - INFO - Child process finished cluster 791. Wrote cluster_791_samples.csv and cluster_791_params.csv
2026-06-05 03:35:11,076 - cnv_pipe.batch.run_model - INFO - Cluster 791 finished in 96.64 seconds. Status: SUCCESS