File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/e2e3714955bc5d16fb9c336c6a0230/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kfz_4yvh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:32:31,581 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:32:32,374 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:32:32,544 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:32:33,582 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:32:33,807 - cnv_pipe.batch.run_model - INFO - Processing cluster 409 with 180 probes
2026-06-05 03:32:34,183 - cnv_pipe.batch.run_model.cluster409 - INFO - Child process started for cluster 409 with 180 probes
2026-06-05 03:33:28,446 - cnv_pipe.batch.run_model.cluster409 - INFO - Child process finished cluster 409. Wrote cluster_409_samples.csv and cluster_409_params.csv
2026-06-05 03:33:28,447 - cnv_pipe.batch.run_model - INFO - Cluster 409 finished in 54.64 seconds. Status: SUCCESS