mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gyxxtpjn because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:30:41,818 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:30:42,705 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:30:42,877 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:30:43,908 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:30:43,982 - cnv_pipe.batch.run_model - INFO - Processing cluster 66 with 83 probes
2026-06-05 03:30:44,372 - cnv_pipe.batch.run_model.cluster66 - INFO - Child process started for cluster 66 with 83 probes
2026-06-05 03:31:13,201 - cnv_pipe.batch.run_model.cluster66 - INFO - Child process finished cluster 66. Wrote cluster_66_samples.csv and cluster_66_params.csv
2026-06-05 03:31:13,202 - cnv_pipe.batch.run_model - INFO - Cluster 66 finished in 29.22 seconds. Status: SUCCESS