mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-g1gq2oq1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:30:55,740 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:30:56,797 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:30:56,999 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:30:58,070 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:30:58,259 - cnv_pipe.batch.run_model - INFO - Processing cluster 140 with 158 probes
2026-06-05 03:30:58,711 - cnv_pipe.batch.run_model.cluster140 - INFO - Child process started for cluster 140 with 158 probes
2026-06-05 03:31:54,395 - cnv_pipe.batch.run_model.cluster140 - INFO - Child process finished cluster 140. Wrote cluster_140_samples.csv and cluster_140_params.csv
2026-06-05 03:31:54,396 - cnv_pipe.batch.run_model - INFO - Cluster 140 finished in 56.14 seconds. Status: SUCCESS