File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/10/0a3e7be237bba5bcf5b0b1b2019df9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5u_k1s4b because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:17,512 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:18,317 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:18,485 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:19,373 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:19,534 - cnv_pipe.batch.run_model - INFO - Processing cluster 990 with 200 probes
2026-06-05 03:33:19,908 - cnv_pipe.batch.run_model.cluster990 - INFO - Child process started for cluster 990 with 200 probes
2026-06-05 03:34:18,936 - cnv_pipe.batch.run_model.cluster990 - INFO - Child process finished cluster 990. Wrote cluster_990_samples.csv and cluster_990_params.csv
2026-06-05 03:34:18,937 - cnv_pipe.batch.run_model - INFO - Cluster 990 finished in 59.40 seconds. Status: SUCCESS