mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-edyiqtov because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:39,089 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:39,893 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:40,062 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:40,981 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:41,148 - cnv_pipe.batch.run_model - INFO - Processing cluster 793 with 159 probes
2026-06-05 03:33:41,532 - cnv_pipe.batch.run_model.cluster793 - INFO - Child process started for cluster 793 with 159 probes
2026-06-05 03:34:29,515 - cnv_pipe.batch.run_model.cluster793 - INFO - Child process finished cluster 793. Wrote cluster_793_samples.csv and cluster_793_params.csv
2026-06-05 03:34:29,516 - cnv_pipe.batch.run_model - INFO - Cluster 793 finished in 48.37 seconds. Status: SUCCESS