File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b0/6e6e49462a4cd2df935a72125a01c7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-m82nrtpw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:32:27,725 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:32:28,590 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:32:28,765 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:32:29,805 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:32:29,980 - cnv_pipe.batch.run_model - INFO - Processing cluster 605 with 193 probes
2026-06-05 03:32:30,360 - cnv_pipe.batch.run_model.cluster605 - INFO - Child process started for cluster 605 with 193 probes
2026-06-05 03:33:30,037 - cnv_pipe.batch.run_model.cluster605 - INFO - Child process finished cluster 605. Wrote cluster_605_samples.csv and cluster_605_params.csv
2026-06-05 03:33:30,039 - cnv_pipe.batch.run_model - INFO - Cluster 605 finished in 60.06 seconds. Status: SUCCESS