mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-q3y7wkde because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:49,196 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:50,013 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:50,188 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:51,250 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:51,409 - cnv_pipe.batch.run_model - INFO - Processing cluster 850 with 199 probes
2026-06-05 03:33:51,790 - cnv_pipe.batch.run_model.cluster850 - INFO - Child process started for cluster 850 with 199 probes
2026-06-05 03:34:53,703 - cnv_pipe.batch.run_model.cluster850 - INFO - Child process finished cluster 850. Wrote cluster_850_samples.csv and cluster_850_params.csv
2026-06-05 03:34:53,705 - cnv_pipe.batch.run_model - INFO - Cluster 850 finished in 62.30 seconds. Status: SUCCESS