.command.log - Workdir - DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_2;chr4_22420786-22421189.bed)

File Info

Filename: .command.log
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/9b908759f9b45c4810d6ce1f03e010/.command.log
Size: 87.4 KB
Task: DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_2;chr4_22420786-22421189.bed)
Attempt
Content

  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/9b908759f9b45c4810d6ce1f03e010/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr4_22420786-22421189.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/8cbb0d678506e322fe573f22da46e2/Sig_18_tissue.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/8cbb0d678506e322fe573f22da46e2/Sig_18_tissue.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/9b908759f9b45c4810d6ce1f03e010/.command.run
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-05T03:28:54.919066Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T03:28:54.920139Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T03:28:54.920154Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T03:28:54.920161Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T03:28:54.920169Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXeQ4jbF'
[2026-06-05T03:28:54.920175Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T03:28:54.920184Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T03:28:54.920189Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T03:28:54.920194Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-05T03:28:54.920199Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T03:28:54.920204Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T03:28:54.920208Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T03:28:54.920212Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T03:28:54.920215Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T03:28:54.920746Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T03:28:54.920864Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T03:28:54.926837Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T03:28:54.927619Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T03:28:54.927865Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T03:28:54.928126Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T03:28:54.928392Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.929237Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.929459Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.929693Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.929914Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.930586Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.932041Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.932827Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.933015Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T03:28:54.933095Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.933532Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.933616Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.933735Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.933799Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.933949Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.934025Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.934137Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.934204Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.934314Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.934378Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.934557Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.934731Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.935155Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.935236Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.935349Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.935413Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.935531Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.935594Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.935701Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.935766Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.935874Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.935977Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.936106Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.936383Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.936843Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.936910Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.937021Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.937086Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.937196Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.937258Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.937377Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.937441Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.937555Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.937618Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.937725Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.937868Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.938200Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.938775Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.938947Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.939024Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.939143Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.939214Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.939329Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.939394Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.939508Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.939576Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.939950Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.940487Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.940680Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.940773Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.940901Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.940976Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.941102Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.941173Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.941285Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.941358Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.941571Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.941750Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.942624Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.942718Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.942848Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.942922Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.943039Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.943112Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.944718Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.945345Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.945487Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.945560Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.945677Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.945744Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.945854Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.945915Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.946032Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.946096Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.946203Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.946277Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.947023Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.947639Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.947820Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.947899Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.948031Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.948106Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.948221Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.948306Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.948428Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.948519Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.966247Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.966449Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.966525Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.966733Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.966804Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.966982Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.967160Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.967412Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.968416Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.968697Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.968978Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.969429Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T03:28:54.969993Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T03:28:54.970173Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.971038Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.971817Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.972476Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.973455Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.974475Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:54.987646Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T03:28:54.989015Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T03:28:54.992563Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T03:28:54.997167Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T03:28:55.002589Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T03:28:55.005546Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T03:28:55.006453Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T03:28:55.219926Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T03:28:55.220525Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.221711Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.227888Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-06-05T03:28:55.436721Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.437988Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.441847Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-06-05T03:28:55.552840Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.554142Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.557618Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-06-05T03:28:55.869855Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.870947Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:55.874407Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T03:28:56.386529Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.387599Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.391314Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-06-05T03:28:56.602855Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.603973Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.607409Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T03:28:56.668857Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.669884Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.673393Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T03:28:56.734502Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.735479Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.739659Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T03:28:56.752180Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.753299Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.756862Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T03:28:56.818078Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.819062Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:56.823033Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-06-05T03:28:57.284851Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.285916Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.289068Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-05T03:28:57.350634Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.350734Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.351787Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.352143Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.356400Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-06-05T03:28:57.357183Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T03:28:57.517296Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.518227Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.522055Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T03:28:57.683237Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.684436Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-05T03:28:57.688874Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-06-05T03:28:58.301115Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.301234Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.302142Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.302499Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.305963Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-05T03:28:58.307362Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-06-05T03:28:58.367465Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.368562Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.371879Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-06-05T03:28:58.483468Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.484512Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.487909Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T03:28:58.548691Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.549703Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.553278Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T03:28:58.664713Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.665735Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.669089Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T03:28:58.730349Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.731380Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.734866Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-05T03:28:58.735364Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.736246Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.738930Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T03:28:58.801709Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.801826Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.802722Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.803034Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.807567Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T03:28:58.808467Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T03:28:58.969420Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.970395Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:58.973487Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-05T03:28:59.034863Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.035748Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.039229Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-05T03:28:59.100385Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.101383Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.104796Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-05T03:28:59.165975Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.166988Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.170995Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T03:28:59.231791Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.232820Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.236377Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-06-05T03:28:59.297598Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.298552Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.301990Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-06-05T03:28:59.363367Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.364445Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.367987Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-06-05T03:28:59.397143Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.398042Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.401551Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-06-05T03:28:59.463041Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.464036Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.467440Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-06-05T03:28:59.679625Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.680587Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.683718Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-06-05T03:28:59.745188Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.746111Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.749249Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-06-05T03:28:59.778436Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.778540Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.779349Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.781405Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.782410Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-05T03:28:59.785539Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-06-05T03:28:59.846328Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.846442Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.847246Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.847627Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:28:59.851798Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T03:28:59.853134Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-06-05T03:29:00.013168Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.013271Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.014148Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.014657Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.019195Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T03:29:00.019741Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T03:29:00.531909Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.532841Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.536084Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T03:29:00.647516Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.648345Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.650962Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-06-05T03:29:00.664308Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.665104Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.667971Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-06-05T03:29:00.681309Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.682071Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.684864Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T03:29:00.714164Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.714952Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.718231Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-06-05T03:29:00.779306Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.780164Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.783449Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T03:29:00.844746Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.845558Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:29:00.848946Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-06-05T03:29:01.161411Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.161510Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.162256Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.162630Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.166035Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-05T03:29:01.167319Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-06-05T03:29:01.227335Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.228182Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.231634Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-05T03:29:01.293017Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.293905Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.297130Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T03:29:01.408773Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.409562Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.412420Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-06-05T03:29:01.473790Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.474667Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.477762Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-06-05T03:29:01.538866Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.538967Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.539670Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.540195Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.543554Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-05T03:29:01.544875Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-06-05T03:29:01.572637Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.573383Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.573969Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.576719Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.577408Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T03:29:01.579669Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-06-05T03:29:01.609312Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.610052Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:29:01.612718Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T03:29:02.025355Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.026474Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.026860Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.029305Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.029709Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-05T03:29:02.032379Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T03:29:02.045394Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.046026Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.049203Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T03:29:02.078093Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.078767Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.082419Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T03:29:02.343808Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.344598Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.348023Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-06-05T03:29:02.409493Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.410227Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.413703Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-05T03:29:02.474489Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.475185Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.477903Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.478741Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-06-05T03:29:02.478855Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.481827Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T03:29:02.511231Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.511875Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.514840Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T03:29:02.515545Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.516038Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.518851Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T03:29:02.548323Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.548948Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.552461Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-06-05T03:29:02.581222Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.581869Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.585227Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-06-05T03:29:02.646128Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.646768Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.650328Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-05T03:29:02.711178Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.711852Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.715345Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T03:29:02.776381Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.776499Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.777070Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.777455Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.780879Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-05T03:29:02.781517Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T03:29:02.809843Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.810427Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.813329Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-06-05T03:29:02.818372Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.818880Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.821556Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T03:29:02.850743Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.850845Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.851322Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.851784Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.854817Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T03:29:02.884513Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T03:29:02.884956Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.885759Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.886173Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.889062Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T03:29:02.950704Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.950783Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.951276Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T03:29:02.954271Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T03:29:02.983424Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.047546Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.048027Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.050683Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-05T03:29:03.080082Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.495154Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.495655Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.498479Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T03:29:03.527765Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.527834Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.527857Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.528267Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.528592Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.531396Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-05T03:29:03.532203Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T03:29:03.560654Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:03.560720Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.075574Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.076009Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.078671Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T03:29:04.140189Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.140479Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.140609Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.140928Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.141147Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.145852Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T03:29:04.147112Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T03:29:04.147937Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T03:29:04.174161Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.174218Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.174407Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.174722Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.177410Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T03:29:04.179195Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.204296Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T03:29:04.210972Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.211039Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.211200Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T03:29:04.213378Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T03:29:04.243078Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T03:29:05.560230Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T03:29:13.808673Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T03:29:13.808673Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] 
[2026-06-05T03:29:13.808673Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T03:29:13.808733Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] 
[2026-06-05T03:29:13.808741Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T03:29:13.808748Z] [nf-3d9b908759f9b45c4810d6ce1f03e010-1f309-bsxbx] [603_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec