File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/db/0ca7574fa48f612e13b4a1c3479f02/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-v61990oe because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:32:31,569 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:32:32,358 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:32:32,531 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:32:33,567 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:32:33,731 - cnv_pipe.batch.run_model - INFO - Processing cluster 598 with 194 probes
2026-06-05 03:32:34,112 - cnv_pipe.batch.run_model.cluster598 - INFO - Child process started for cluster 598 with 194 probes
2026-06-05 03:33:34,141 - cnv_pipe.batch.run_model.cluster598 - INFO - Child process finished cluster 598. Wrote cluster_598_samples.csv and cluster_598_params.csv
2026-06-05 03:33:34,143 - cnv_pipe.batch.run_model - INFO - Cluster 598 finished in 60.41 seconds. Status: SUCCESS