File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b3/9c85f095959d8f09805a1b4c5d6b7e/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zluz002a because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:33,799 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:34,598 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:34,768 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:35,680 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:35,841 - cnv_pipe.batch.run_model - INFO - Processing cluster 1093 with 102 probes
2026-06-05 03:33:36,214 - cnv_pipe.batch.run_model.cluster1093 - INFO - Child process started for cluster 1093 with 102 probes
2026-06-05 03:34:08,680 - cnv_pipe.batch.run_model.cluster1093 - INFO - Child process finished cluster 1093. Wrote cluster_1093_samples.csv and cluster_1093_params.csv
2026-06-05 03:34:08,680 - cnv_pipe.batch.run_model - INFO - Cluster 1093 finished in 32.84 seconds. Status: SUCCESS