File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/fc/1ad9eecbbb06a4a3b87ff7db761699/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-yhhias6i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:34:08,170 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:34:09,037 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:34:09,206 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:34:10,136 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:34:10,313 - cnv_pipe.batch.run_model - INFO - Processing cluster 1296 with 196 probes
2026-06-05 03:34:10,685 - cnv_pipe.batch.run_model.cluster1296 - INFO - Child process started for cluster 1296 with 196 probes
2026-06-05 03:35:09,255 - cnv_pipe.batch.run_model.cluster1296 - INFO - Child process finished cluster 1296. Wrote cluster_1296_samples.csv and cluster_1296_params.csv
2026-06-05 03:35:09,256 - cnv_pipe.batch.run_model - INFO - Cluster 1296 finished in 58.94 seconds. Status: SUCCESS