mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3nijsnz_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:29,387 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:30,215 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:30,384 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:31,324 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:31,402 - cnv_pipe.batch.run_model - INFO - Processing cluster 862 with 190 probes
2026-06-05 03:33:31,902 - cnv_pipe.batch.run_model.cluster862 - INFO - Child process started for cluster 862 with 190 probes
2026-06-05 03:34:27,926 - cnv_pipe.batch.run_model.cluster862 - INFO - Child process finished cluster 862. Wrote cluster_862_samples.csv and cluster_862_params.csv
2026-06-05 03:34:27,928 - cnv_pipe.batch.run_model - INFO - Cluster 862 finished in 56.53 seconds. Status: SUCCESS