mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bfj3lxrc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:32:33,296 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:32:34,095 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:32:34,267 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:32:35,276 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:32:35,441 - cnv_pipe.batch.run_model - INFO - Processing cluster 685 with 175 probes
2026-06-05 03:32:35,813 - cnv_pipe.batch.run_model.cluster685 - INFO - Child process started for cluster 685 with 175 probes
2026-06-05 03:33:28,547 - cnv_pipe.batch.run_model.cluster685 - INFO - Child process finished cluster 685. Wrote cluster_685_samples.csv and cluster_685_params.csv
2026-06-05 03:33:28,548 - cnv_pipe.batch.run_model - INFO - Cluster 685 finished in 53.11 seconds. Status: SUCCESS