mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-s3w5jwa9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:39,094 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:39,929 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:40,098 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:41,044 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:41,208 - cnv_pipe.batch.run_model - INFO - Processing cluster 1047 with 163 probes
2026-06-05 03:33:41,581 - cnv_pipe.batch.run_model.cluster1047 - INFO - Child process started for cluster 1047 with 163 probes
2026-06-05 03:34:33,160 - cnv_pipe.batch.run_model.cluster1047 - INFO - Child process finished cluster 1047. Wrote cluster_1047_samples.csv and cluster_1047_params.csv
2026-06-05 03:34:33,161 - cnv_pipe.batch.run_model - INFO - Cluster 1047 finished in 51.95 seconds. Status: SUCCESS