mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-raon_5mu because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:34:23,952 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:34:24,767 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:34:24,935 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:34:25,922 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:34:25,990 - cnv_pipe.batch.run_model - INFO - Processing cluster 1394 with 199 probes
2026-06-05 03:34:26,366 - cnv_pipe.batch.run_model.cluster1394 - INFO - Child process started for cluster 1394 with 199 probes
2026-06-05 03:35:24,322 - cnv_pipe.batch.run_model.cluster1394 - INFO - Child process finished cluster 1394. Wrote cluster_1394_samples.csv and cluster_1394_params.csv
2026-06-05 03:35:24,324 - cnv_pipe.batch.run_model - INFO - Cluster 1394 finished in 58.33 seconds. Status: SUCCESS