mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fu9gd7y4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:43,221 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:44,556 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:44,842 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:46,580 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:46,837 - cnv_pipe.batch.run_model - INFO - Processing cluster 696 with 170 probes
2026-06-05 03:33:47,484 - cnv_pipe.batch.run_model.cluster696 - INFO - Child process started for cluster 696 with 170 probes
2026-06-05 03:35:10,516 - cnv_pipe.batch.run_model.cluster696 - INFO - Child process finished cluster 696. Wrote cluster_696_samples.csv and cluster_696_params.csv
2026-06-05 03:35:10,517 - cnv_pipe.batch.run_model - INFO - Cluster 696 finished in 83.68 seconds. Status: SUCCESS