mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5bidn8ou because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:30:52,850 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:30:53,839 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:30:54,033 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:30:55,123 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:30:55,313 - cnv_pipe.batch.run_model - INFO - Processing cluster 125 with 162 probes
2026-06-05 03:30:55,801 - cnv_pipe.batch.run_model.cluster125 - INFO - Child process started for cluster 125 with 162 probes
2026-06-05 03:31:52,783 - cnv_pipe.batch.run_model.cluster125 - INFO - Child process finished cluster 125. Wrote cluster_125_samples.csv and cluster_125_params.csv
2026-06-05 03:31:52,784 - cnv_pipe.batch.run_model - INFO - Cluster 125 finished in 57.47 seconds. Status: SUCCESS