mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-z7s54gs7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:30:44,923 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:30:45,729 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:30:45,896 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:30:46,808 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:30:46,973 - cnv_pipe.batch.run_model - INFO - Processing cluster 86 with 190 probes
2026-06-05 03:30:47,361 - cnv_pipe.batch.run_model.cluster86 - INFO - Child process started for cluster 86 with 190 probes
2026-06-05 03:31:45,268 - cnv_pipe.batch.run_model.cluster86 - INFO - Child process finished cluster 86. Wrote cluster_86_samples.csv and cluster_86_params.csv
2026-06-05 03:31:45,269 - cnv_pipe.batch.run_model - INFO - Cluster 86 finished in 58.30 seconds. Status: SUCCESS