File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0b/91dbd131fb358c7b10a49c3dd6d2d3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-cn0x0u3p because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:33:15,511 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:33:16,309 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:33:16,480 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:33:17,483 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:33:17,558 - cnv_pipe.batch.run_model - INFO - Processing cluster 732 with 197 probes
2026-06-05 03:33:18,040 - cnv_pipe.batch.run_model.cluster732 - INFO - Child process started for cluster 732 with 197 probes
2026-06-05 03:34:16,792 - cnv_pipe.batch.run_model.cluster732 - INFO - Child process finished cluster 732. Wrote cluster_732_samples.csv and cluster_732_params.csv
2026-06-05 03:34:16,793 - cnv_pipe.batch.run_model - INFO - Cluster 732 finished in 59.24 seconds. Status: SUCCESS