mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fjkpmshz because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 03:30:50,076 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 03:30:50,865 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 03:30:51,033 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 03:30:51,923 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 03:30:52,074 - cnv_pipe.batch.run_model - INFO - Processing cluster 116 with 181 probes
2026-06-05 03:30:52,446 - cnv_pipe.batch.run_model.cluster116 - INFO - Child process started for cluster 116 with 181 probes
2026-06-05 03:31:45,488 - cnv_pipe.batch.run_model.cluster116 - INFO - Child process finished cluster 116. Wrote cluster_116_samples.csv and cluster_116_params.csv
2026-06-05 03:31:45,488 - cnv_pipe.batch.run_model - INFO - Cluster 116 finished in 53.41 seconds. Status: SUCCESS