File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8a/1116248d979fd0bf733a51fa508a09/.command.err
Size
100.8 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr6_138229684-138229952.bed)
Attempt

Content

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[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXDOfzXK/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXDOfzXK/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXDOfzXK/chr6_138229684-138229952.bed.gz.tbi
[2026-06-05T13:59:51.129773Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-05T13:59:51.131247Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-05T13:59:51.131280Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-05T13:59:51.131287Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-05T13:59:51.131294Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXDOfzXK'
[2026-06-05T13:59:51.131300Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-05T13:59:51.131308Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-05T13:59:51.131313Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-05T13:59:51.131318Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] [RunParameters] memMb: 1547931
[2026-06-05T13:59:51.131323Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-05T13:59:51.131327Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-05T13:59:51.131332Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-05T13:59:51.131337Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-05T13:59:51.131341Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-05T13:59:51.132415Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-05T13:59:51.132822Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-05T13:59:51.139199Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-05T13:59:51.140005Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-05T13:59:51.140230Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-05T13:59:51.140610Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-05T13:59:51.141265Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.141891Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.141996Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.142072Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.142195Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.142364Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.142926Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.143491Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.143827Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.144011Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.144177Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.144347Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.144437Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.147280Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.147545Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-05T13:59:51.147780Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.148015Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.148101Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.148234Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.148482Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.148870Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.148941Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.149060Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.149127Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.149239Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.149302Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.149422Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.149486Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.149605Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.149677Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.149853Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.149956Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.150443Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.150782Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.150923Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.151010Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.151138Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.151207Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.151325Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.151391Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.151503Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.151563Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.151676Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.151746Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.151913Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.152104Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.152986Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.153667Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.153871Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.153953Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.154073Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.154146Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.154282Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.154405Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.154971Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.155044Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.155171Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.155240Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.155357Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.155424Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.155552Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.155620Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.155740Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.155857Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.156012Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.156208Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.156860Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.156925Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.157046Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.157113Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.157224Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.157291Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.157405Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.157474Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.159131Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.159749Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.159890Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.159967Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.160090Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.160161Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.160282Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.160350Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.160511Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.160580Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.160706Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.160858Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.161615Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.161694Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.161807Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.161870Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.161982Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.162050Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.162155Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.162221Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.162335Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.162397Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.162539Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.162633Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.162964Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.163618Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.163796Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.163866Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.163985Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.164048Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.164155Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.164220Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.164329Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.164427Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.164542Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.164706Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.167358Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.168161Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.168443Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.168516Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.181691Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.182380Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.182493Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.182692Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.183501Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.184038Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.184651Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.184692Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.185255Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.185392Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.185815Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.186217Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.186572Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.186888Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-05T13:59:51.187090Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-05T13:59:51.187149Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.189903Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.190154Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-05T13:59:51.190782Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.191550Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.199724Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T13:59:51.202065Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-05T13:59:51.203245Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-05T13:59:51.207913Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-05T13:59:51.212594Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-05T13:59:51.327830Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.329064Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:51.332828Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-05T13:59:52.446770Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.448046Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.451495Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T13:59:52.513769Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.515022Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.518237Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-05T13:59:52.629846Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.631202Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:52.634779Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-05T13:59:53.145379Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-05T13:59:53.147042Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.148251Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.152040Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-05T13:59:53.263033Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.264251Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.267163Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-05T13:59:53.328629Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.329835Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.333221Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T13:59:53.369153Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T13:59:53.394574Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.394650Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.394682Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.395859Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.396705Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.397348Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.400223Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-05T13:59:53.403217Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T13:59:53.404816Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T13:59:53.515462Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.515545Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.516787Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.517347Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.521388Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-05T13:59:53.522562Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T13:59:53.582926Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.584792Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.585477Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.588476Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.588846Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-05T13:59:53.592015Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-05T13:59:53.654077Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.655282Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.658633Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-05T13:59:53.719780Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.719885Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.721210Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.721996Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.724640Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-05T13:59:53.725412Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-05T13:59:53.756075Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.757142Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.759874Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-05T13:59:53.790686Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.791831Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.795148Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-05T13:59:53.856388Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.857566Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:53.860881Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-05T13:59:54.072599Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.073773Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.076953Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-05T13:59:54.106253Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.107440Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.110764Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-05T13:59:54.323252Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.324442Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.327779Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-05T13:59:54.390204Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.391470Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.395241Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-05T13:59:54.456142Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.457355Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:54.460727Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-05T13:59:55.274018Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.275178Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.278379Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-05T13:59:55.339597Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.340726Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.344246Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-05T13:59:55.405154Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.405238Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.406329Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.406938Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.409929Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-05T13:59:55.439388Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-05T13:59:55.441401Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.441474Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.442518Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.443035Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.447256Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-05T13:59:55.448242Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-05T13:59:55.476048Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.477455Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.478071Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.481020Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.482790Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-05T13:59:55.483923Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-05T13:59:55.545306Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.546364Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.550006Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-05T13:59:55.578772Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.578865Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.579813Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.580039Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.583747Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-05T13:59:55.584259Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.585173Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-05T13:59:55.585597Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.588502Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-05T13:59:55.618044Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.618127Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.618157Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.619465Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.619860Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.620254Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.620855Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.625527Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-05T13:59:55.628061Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T13:59:55.629274Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.632310Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-05T13:59:55.698307Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-05T13:59:55.743975Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.744088Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.745011Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.745553Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.749047Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-05T13:59:55.750638Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T13:59:55.810583Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.810675Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.811691Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.813587Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.815675Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T13:59:55.817176Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T13:59:55.878638Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.879614Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.883201Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-05T13:59:55.944015Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.944107Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.945003Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.946818Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.949172Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-05T13:59:55.950273Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-05T13:59:55.979943Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.981503Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:55.984565Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-05T13:59:56.045733Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.047095Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.050021Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-05T13:59:56.111209Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.111321Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.112558Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.112904Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.115865Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-05T13:59:56.117016Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-05T13:59:56.177345Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.178724Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.182520Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-05T13:59:56.243193Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.244469Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.247714Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T13:59:56.308798Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.310053Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.313162Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-05T13:59:56.374145Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.375652Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.379111Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-05T13:59:56.440020Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.441522Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.445148Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-05T13:59:56.556447Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.557654Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.561030Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-05T13:59:56.621807Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.623094Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.626285Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-05T13:59:56.687400Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.688686Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.692564Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-05T13:59:56.953541Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.954728Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:56.958393Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-05T13:59:57.019170Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.019273Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.020414Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.020839Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.024643Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-05T13:59:57.025979Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-05T13:59:57.085546Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.085648Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.086799Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.087151Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.090893Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-05T13:59:57.092118Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-05T13:59:57.121560Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.123132Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.123602Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.124731Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.127692Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-05T13:59:57.128707Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-05T13:59:57.190081Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.190153Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.191305Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.191899Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.195919Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-05T13:59:57.196501Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T13:59:57.657325Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.658463Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.661679Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-05T13:59:57.973203Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.973310Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.974477Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.974963Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:57.978076Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-05T13:59:57.978834Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-05T13:59:58.007167Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.008601Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.008940Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.010829Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.013346Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-05T13:59:58.014073Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-05T13:59:58.043374Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.044475Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.047034Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-05T13:59:58.076530Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.077703Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.080350Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-05T13:59:58.109711Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.110767Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.113460Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-05T13:59:58.275019Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.276094Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.279328Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-05T13:59:58.340299Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.340381Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.341159Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.341742Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.345435Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T13:59:58.346587Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-05T13:59:58.349908Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.350487Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.352991Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-05T13:59:58.382470Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.383082Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.385551Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-05T13:59:58.415245Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.415833Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.418636Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-05T13:59:58.447905Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.447984Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.448017Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.448621Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.449091Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.449511Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.452778Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-05T13:59:58.454292Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-05T13:59:58.455214Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-05T13:59:58.482457Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.483421Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.484971Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.485695Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.485966Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-05T13:59:58.488437Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-05T13:59:58.518873Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.518936Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.519465Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.519744Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.523506Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-05T13:59:58.524756Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-05T13:59:58.552354Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.552948Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.555638Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-05T13:59:58.586365Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.586962Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.589603Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-05T13:59:58.619127Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.619749Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.622625Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T13:59:58.684157Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.684711Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.687432Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-05T13:59:58.716830Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.717414Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.719660Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-05T13:59:58.749539Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.750112Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.752736Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-05T13:59:58.782054Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.782584Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.785621Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T13:59:58.847934Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.848465Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-05T13:59:58.850874Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-05T13:59:58.880642Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.044917Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.044987Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.045452Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.047028Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.048588Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-05T13:59:59.049488Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-05T13:59:59.080277Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.080349Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.494862Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.494935Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.494960Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.495417Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.497080Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.497599Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.497824Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-05T13:59:59.500861Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-05T13:59:59.502126Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-05T13:59:59.561795Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.561863Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.561891Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.675850Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.676283Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.678658Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-05T13:59:59.708410Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.772407Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.772902Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.774944Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-05T13:59:59.804757Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.805062Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.805207Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.805697Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.806516Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.809394Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-05T13:59:59.811420Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-05T13:59:59.812246Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-05T13:59:59.840204Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.840257Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.840279Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.840477Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.840694Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.842754Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-05T13:59:59.844516Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-05T13:59:59.874189Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.874259Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.874468Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-05T13:59:59.876885Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-05T13:59:59.906497Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-05T14:00:01.774745Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-05T14:00:10.020295Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-05T14:00:10.020295Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] 
[2026-06-05T14:00:10.020295Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-05T14:00:10.020351Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] 
[2026-06-05T14:00:10.020357Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-05T14:00:10.020364Z] [nf-8a1116248d979fd0bf733a51fa508a09-650ce-zmqt4] [628_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec