mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3wl0o_om because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:03:44,483 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:03:45,373 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:03:45,550 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:03:46,750 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:03:46,988 - cnv_pipe.batch.run_model - INFO - Processing cluster 703 with 178 probes
2026-06-05 14:03:47,373 - cnv_pipe.batch.run_model.cluster703 - INFO - Child process started for cluster 703 with 178 probes
2026-06-05 14:04:44,783 - cnv_pipe.batch.run_model.cluster703 - INFO - Child process finished cluster 703. Wrote cluster_703_samples.csv and cluster_703_params.csv
2026-06-05 14:04:44,785 - cnv_pipe.batch.run_model - INFO - Cluster 703 finished in 57.80 seconds. Status: SUCCESS