File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/1b9a1e0a74401294cd8fe60371ac08/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pw2ub4du because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:05:03,283 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:05:04,131 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:05:04,306 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:05:05,314 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:05:05,470 - cnv_pipe.batch.run_model - INFO - Processing cluster 1142 with 194 probes
2026-06-05 14:05:05,850 - cnv_pipe.batch.run_model.cluster1142 - INFO - Child process started for cluster 1142 with 194 probes
2026-06-05 14:06:07,095 - cnv_pipe.batch.run_model.cluster1142 - INFO - Child process finished cluster 1142. Wrote cluster_1142_samples.csv and cluster_1142_params.csv
2026-06-05 14:06:07,097 - cnv_pipe.batch.run_model - INFO - Cluster 1142 finished in 61.63 seconds. Status: SUCCESS