File Info

Filename
.command.log
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/72971a9e11076a5df7de6a51fbe950/.command.log
Size
1.6 KB
Task
DAQ:SAMTOOLS_MERGE (Sig_18_Blood)
Attempt

Content

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  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/6769b6d9fba38af4dc6b8697a9c8be/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/40/903409548b53e02af52920469900e0/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/72971a9e11076a5df7de6a51fbe950/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/87/1d97ac39b6f7a63884951846238c10/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/90/930ad0abafb04516d35365c804fea5/Sig_18_Blood.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e6/5a5f6ed8729d88fd2b498391883827/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c5/1c351686bf06996b3ab8fa2833402f/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e4/8077d149fe061310d6120141ebab3b/Sig_18_Blood.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4f/72971a9e11076a5df7de6a51fbe950/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/01/7b2c53a341d39c2bd42f2abeb2098c/Sig_18_Blood.bam
==> STAGING COMPLETE (12 inputs)

ls: cannot access '*.cram': No such file or directory
ls: cannot access '*.crai': No such file or directory