File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c3/de98973b3dd83976fb2c25e304435b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_o0nr1ly because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:01:54,253 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:01:55,176 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:01:55,350 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:01:56,397 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:01:56,582 - cnv_pipe.batch.run_model - INFO - Processing cluster 101 with 119 probes
2026-06-05 14:01:56,966 - cnv_pipe.batch.run_model.cluster101 - INFO - Child process started for cluster 101 with 119 probes
2026-06-05 14:02:38,372 - cnv_pipe.batch.run_model.cluster101 - INFO - Child process finished cluster 101. Wrote cluster_101_samples.csv and cluster_101_params.csv
2026-06-05 14:02:38,373 - cnv_pipe.batch.run_model - INFO - Cluster 101 finished in 41.79 seconds. Status: SUCCESS