cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/foresight_clarity_targets_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_foresight_clarity_targets_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:161000001, elapsed 0.0s, est remaining 0.5s, peak mem 99MB, user 0.1s, sys 0.4s, output queue size 22
progress 10% @chr2:75000001, elapsed 0.0s, est remaining 0.4s, peak mem 99MB, user 0.2s, sys 0.9s, output queue size 14
progress 15% @chr2:234000001, elapsed 0.1s, est remaining 0.4s, peak mem 99MB, user 0.2s, sys 1.5s, output queue size 23
progress 20% @chr3:154000001, elapsed 0.1s, est remaining 0.3s, peak mem 99MB, user 0.3s, sys 2.0s, output queue size 13
progress 25% @chr4:115000001, elapsed 0.1s, est remaining 0.3s, peak mem 99MB, user 0.3s, sys 2.6s, output queue size 7
progress 30% @chr5:90000001, elapsed 0.1s, est remaining 0.3s, peak mem 99MB, user 0.4s, sys 3.1s, output queue size 19
progress 35% @chr6:67000001, elapsed 0.1s, est remaining 0.3s, peak mem 99MB, user 0.5s, sys 3.7s, output queue size 25
progress 40% @chr7:56000001, elapsed 0.2s, est remaining 0.3s, peak mem 99MB, user 0.5s, sys 4.2s, output queue size 1
progress 45% @chr8:53000001, elapsed 0.2s, est remaining 0.2s, peak mem 99MB, user 0.6s, sys 4.7s, output queue size 12
progress 50% @chr9:73000001, elapsed 0.2s, est remaining 0.2s, peak mem 99MB, user 0.8s, sys 5.2s, output queue size 18
progress 55% @chr10:97000001, elapsed 0.2s, est remaining 0.2s, peak mem 99MB, user 0.8s, sys 5.7s, output queue size 7
progress 60% @chr11:126000001, elapsed 0.3s, est remaining 0.2s, peak mem 99MB, user 0.9s, sys 6.3s, output queue size 18
progress 65% @chr13:15000001, elapsed 0.3s, est remaining 0.1s, peak mem 99MB, user 0.9s, sys 6.9s, output queue size 2
progress 70% @chr14:61000001, elapsed 0.3s, est remaining 0.1s, peak mem 99MB, user 1.1s, sys 7.5s, output queue size 2
progress 75% @chr16:12000001, elapsed 0.3s, est remaining 0.1s, peak mem 99MB, user 1.1s, sys 8.1s, output queue size 15
progress 80% @chr18:1000001, elapsed 0.3s, est remaining 0.1s, peak mem 99MB, user 1.2s, sys 8.7s, output queue size 9
progress 85% @chr20:23000001, elapsed 0.4s, est remaining 0.1s, peak mem 99MB, user 1.3s, sys 9.2s, output queue size 17
progress 90% @chrX:36000001, elapsed 0.4s, est remaining 0.0s, peak mem 111MB, user 1.7s, sys 9.6s, output queue size 114
progress 95% @chrY:34000001, elapsed 0.4s, est remaining 0.0s, peak mem 129MB, user 2.1s, sys 10.1s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.7s, est remaining 0.0s, peak mem 150MB, user 3.0s, sys 11.0s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813900
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.107 user 5.672 sys 6.883 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.001 user 0.000 sys 0.707 real
idle: 84 calls 0.007 user 0.014 sys 38.127 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 157388800 mem 3.280 user 11.557 sys 1.849 real