mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-pkkk0y0u because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:03:53,073 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:03:53,934 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:03:54,104 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:03:55,167 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:03:55,251 - cnv_pipe.batch.run_model - INFO - Processing cluster 728 with 192 probes
2026-06-05 14:03:55,779 - cnv_pipe.batch.run_model.cluster728 - INFO - Child process started for cluster 728 with 192 probes
2026-06-05 14:04:58,033 - cnv_pipe.batch.run_model.cluster728 - INFO - Child process finished cluster 728. Wrote cluster_728_samples.csv and cluster_728_params.csv
2026-06-05 14:04:58,034 - cnv_pipe.batch.run_model - INFO - Cluster 728 finished in 62.78 seconds. Status: SUCCESS