mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1ugk3l4_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:03:44,490 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:03:45,328 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:03:45,501 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:03:46,709 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:03:46,777 - cnv_pipe.batch.run_model - INFO - Processing cluster 705 with 179 probes
2026-06-05 14:03:47,161 - cnv_pipe.batch.run_model.cluster705 - INFO - Child process started for cluster 705 with 179 probes
2026-06-05 14:04:43,001 - cnv_pipe.batch.run_model.cluster705 - INFO - Child process finished cluster 705. Wrote cluster_705_samples.csv and cluster_705_params.csv
2026-06-05 14:04:43,002 - cnv_pipe.batch.run_model - INFO - Cluster 705 finished in 56.23 seconds. Status: SUCCESS