File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a4/025d306d85d96c744921e880bb2bee/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-e3v582oi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:04:45,929 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:04:46,807 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:04:46,981 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:04:47,940 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:04:48,163 - cnv_pipe.batch.run_model - INFO - Processing cluster 1103 with 181 probes
2026-06-05 14:04:48,540 - cnv_pipe.batch.run_model.cluster1103 - INFO - Child process started for cluster 1103 with 181 probes
2026-06-05 14:05:44,871 - cnv_pipe.batch.run_model.cluster1103 - INFO - Child process finished cluster 1103. Wrote cluster_1103_samples.csv and cluster_1103_params.csv
2026-06-05 14:05:44,872 - cnv_pipe.batch.run_model - INFO - Cluster 1103 finished in 56.71 seconds. Status: SUCCESS