mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ktif9hza because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-05 14:03:42,467 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-05 14:03:43,778 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-05 14:03:44,059 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-05 14:03:45,787 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-05 14:03:46,046 - cnv_pipe.batch.run_model - INFO - Processing cluster 646 with 189 probes
2026-06-05 14:03:46,661 - cnv_pipe.batch.run_model.cluster646 - INFO - Child process started for cluster 646 with 189 probes
2026-06-05 14:05:19,934 - cnv_pipe.batch.run_model.cluster646 - INFO - Child process finished cluster 646. Wrote cluster_646_samples.csv and cluster_646_params.csv
2026-06-05 14:05:19,936 - cnv_pipe.batch.run_model - INFO - Cluster 646 finished in 93.89 seconds. Status: SUCCESS